RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 SEC16AO15027 2179 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 CFAP46Q8IYW2 2715 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 MASP2O00187 686 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 TUBBP07437 444 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 CCR10P46092 362 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 ARSFP54793 590 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 NAB1Q13506 487 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 TGFBIQ15582 683 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 MRPL14Q6P1L8 145 aaKnown RBP17.85■□□□□ 0.45
GMDS-208ENST00000530927 FRA10AC1Q70Z53 315 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 ARHGEF39Q8N4T4 335 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 ZNF740Q8NDX6 193 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 EXT2Q93063 718 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 NEIL2Q969S2 332 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 CABS1Q96KC9 395 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 UBXN10Q96LJ8 280 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 CATSPER2Q96P56 530 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 CYTH2Q99418 400 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 PCBD2Q9H0N5 130 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 ENAMQ9NRM1 1142 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 IGSF5Q9NSI5 407 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 TMEM184CQ9NVA4 438 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 GPN3Q9UHW5 284 aaPredicted RBP17.85■□□□□ 0.45
GMDS-208ENST00000530927 SLC22A14Q9Y267 594 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 MAN2B2Q9Y2E5 1009 aa17.85■□□□□ 0.45
GMDS-208ENST00000530927 PTRH2Q9Y3E5 179 aaKnown RBP17.85■□□□□ 0.45
GMDS-208ENST00000530927 SPENQ96T58 3664 aaKnown RBP17.84■□□□□ 0.45
GMDS-208ENST00000530927 EIF4E1BA6NMX2 242 aaKnown RBP17.84■□□□□ 0.45
GMDS-208ENST00000530927 TAPBPO15533 448 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 OTX2P32243 289 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 PHBP35232 272 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 NAA25Q14CX7 972 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 WDR93Q6P2C0 686 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 ADAMTSL2Q86TH1 951 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 THOC6Q86W42 341 aaKnown RBP17.84■□□□□ 0.45
GMDS-208ENST00000530927 ZNF843Q8N446 348 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.84■□□□□ 0.45
GMDS-208ENST00000530927 ANKRD7Q92527 254 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 RERGQ96A58 199 aaPredicted RBP17.84■□□□□ 0.45
GMDS-208ENST00000530927 RHBDF1Q96CC6 855 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 WBP1Q96G27 269 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 MESP1Q9BRJ9 268 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 TMEM79Q9BSE2 394 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 FUT8Q9BYC5 575 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 POLHQ9Y253 713 aa17.84■□□□□ 0.45
GMDS-208ENST00000530927 ARGFXA6NJG6 315 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 K7EM74 188 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 UMODP07911 640 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 ANXA5P08758 320 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 MYBL2P10244 700 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 NR1D1P20393 614 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 CCND1P24385 295 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 CSRP3P50461 194 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 PRSS41Q7RTY9 318 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 KCTD4Q8WVF5 259 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 ATL1Q8WXF7 558 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 NXNL1Q96CM4 212 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 SOX17Q9H6I2 414 aaPredicted RBP17.83■□□□□ 0.45
GMDS-208ENST00000530927 ALG9Q9H6U8 611 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 SNX15Q9NRS6 342 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 ASB1Q9Y576 335 aa17.83■□□□□ 0.45
GMDS-208ENST00000530927 ALDOAP04075 364 aaKnown RBP17.82■□□□□ 0.44
GMDS-208ENST00000530927 CDKL1Q00532 357 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 KCNAB2Q13303 367 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 ATP1A4Q13733 1029 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 SYT16Q17RD7 645 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 FAM214AQ32MH5 1076 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 OVCH1Q7RTY7 1134 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 GPSM1Q86YR5 675 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 PRSS58Q8IYP2 241 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 CENPLQ8N0S6 344 aaPredicted RBP17.82■□□□□ 0.44
GMDS-208ENST00000530927 LSM14AQ8ND56 463 aaKnown RBP17.82■□□□□ 0.44
GMDS-208ENST00000530927 APOBEC4Q8WW27 367 aaKnown RBP17.82■□□□□ 0.44
GMDS-208ENST00000530927 SLC44A1Q8WWI5 657 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 MOCOSQ96EN8 888 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 PAFAH2Q99487 392 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 HAUS8Q9BT25 410 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 PARD6BQ9BYG5 372 aa17.82■□□□□ 0.44
GMDS-208ENST00000530927 A0A0A6YYC8 382 aaPredicted RBP17.81■□□□□ 0.44
GMDS-208ENST00000530927 POC1B-GALNT4F8VUJ3 575 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 I3L1I5 382 aaPredicted RBP17.81■□□□□ 0.44
GMDS-208ENST00000530927 TK2O00142 265 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 FOXS1O43638 330 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 WDR47O94967 919 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 C2P06681 752 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 TFEBP19484 476 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 VARSP26640 1264 aaKnown RBP17.81■□□□□ 0.44
GMDS-208ENST00000530927 SLC6A12P48065 614 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 GLRBP48167 497 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 HSPA7P48741 367 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 CCR8P51685 355 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 RPS15AP62244 130 aaKnown RBP17.81■□□□□ 0.44
GMDS-208ENST00000530927 VSNL1P62760 191 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 RELAQ04206 551 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 NKG7Q16617 165 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 MUM1Q2TAK8 710 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 COLEC12Q5KU26 742 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 YOD1Q5VVQ6 348 aaPredicted RBP17.81■□□□□ 0.44
GMDS-208ENST00000530927 TMPRSS11BQ86T26 416 aa17.81■□□□□ 0.44
GMDS-208ENST00000530927 ISCA2Q86U28 154 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms