RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 SRP54P61011 504 aaKnown RBP5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 GCNT1Q02742 428 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 KLHL30Q0D2K2 578 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 LCP2Q13094 533 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 TAF7Q15545 349 aaPredicted RBP5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 C11orf87Q6NUJ2 197 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 B3GLCTQ6Y288 498 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 ADAMTSL2Q86TH1 951 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 PLD3Q8IV08 490 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 PELI3Q8N2H9 469 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 OR2T12Q8NG77 320 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 ZNF473Q8WTR7 871 aaKnown RBP5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 WBP2Q969T9 261 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 MRPL38Q96DV4 380 aaKnown RBP5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 BICD1Q96G01 975 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 ADGRG7Q96K78 797 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 PRMT1Q99873 361 aaKnown RBP5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 TRMT61BQ9BVS5 477 aaKnown RBP5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 MRIQ9BWK5 157 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 LAT2Q9GZY6 243 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 TMEM245Q9H330 911 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 SDR39U1Q9NRG7 319 aaPredicted RBP5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 KCNN3Q9UGI6 736 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 KCNJ14Q9UNX9 436 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 AURKCQ9UQB9 309 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 ATP8B3O60423 1300 aa5.89□□□□□ -1.47
CAPRIN1-208ENST00000530008 A0A1W2PN81 502 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 ASPDHA6ND91 283 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 ARHGAP42A6NI28 874 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 APOHP02749 345 aaPredicted RBP5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 HEXBP07686 556 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 FAM200BP0CF97 657 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 SKILP12757 684 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 F3P13726 295 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 CA4P22748 312 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 CSTF2P33240 577 aaKnown RBP eCLIP5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 SFTPDP35247 375 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 CHRNA7P36544 502 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 CDH11P55287 796 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 LGALS3BPQ08380 585 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 TRAP1Q12931 704 aaKnown RBP5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 ABRQ12979 859 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 SNTA1Q13424 505 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 CCDC40Q4G0X9 1142 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 OR6B2Q6IFH4 312 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 ZNF549Q6P9A3 640 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 ABRAXAS1Q6UWZ7 409 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 UNC5DQ6UXZ4 953 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 TDHQ8IZJ6 230 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 EID3Q8N140 333 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 MAPKAPK5-AS1Q8N8E1 139 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 TMEM185AQ8NFB2 350 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 OR52N5Q8NH56 324 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 GGHQ92820 318 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 SLCO4A1Q96BD0 722 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 HMCESQ96FZ2 354 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 SAMD8Q96LT4 415 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 NSMCE2Q96MF7 247 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 SORCS2Q96PQ0 1159 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 DDX47Q9H0S4 455 aaKnown RBP5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 EBF2Q9HAK2 575 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 FGF21Q9NSA1 209 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 FAM207AQ9NSI2 230 aaPredicted RBP5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 DONSONQ9NYP3 566 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 DNPEPQ9ULA0 475 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 AP1M2Q9Y6Q5 423 aa5.88□□□□□ -1.47
CAPRIN1-208ENST00000530008 O00370 1275 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 MAGEB2O15479 319 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 AKAP8O43823 692 aaKnown RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 XPNPEP2O43895 674 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 PRKRAO75569 313 aaKnown RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 PIGNO95427 931 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 PTBP3O95758 552 aaKnown RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 PDGFBP01127 241 aaPredicted RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 ACAA1P09110 424 aaPredicted RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 MMP10P09238 476 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 GOT1P17174 413 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 ALDH1B1P30837 517 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 DUTP33316 252 aaKnown RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 CNN1P51911 297 aaKnown RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 HNRNPFP52597 415 aaKnown RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 FKBP1BP68106 108 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 PPP1R8Q12972 351 aaKnown RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 SIRPB2Q5JXA9 342 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 SLC35D3Q5M8T2 416 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 DCAF10Q5QP82 559 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 WDR88Q6ZMY6 472 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 PRUNE1Q86TP1 453 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 KRTAP1-3Q8IUG1 177 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 FBXL14Q8N1E6 418 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 THEM5Q8N1Q8 247 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 DNAJC22Q8N4W6 341 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 KLHDC1Q8N7A1 406 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 RFT1Q96AA3 541 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 SLC47A1Q96FL8 570 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 RBM41Q96IZ5 413 aaKnown RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 ALKBH7Q9BT30 221 aaPredicted RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 RNF121Q9H920 327 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 GPN1Q9HCN4 374 aaPredicted RBP5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 CHST11Q9NPF2 352 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms