RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PLCD4Q9BRC7 762 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 EFCAB11Q9BUY7 163 aa23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 NSRP1Q9H0G5 558 aaKnown RBP23.73■■□□□ 1.39
LDLRAD3-203ENST00000528989 HEATR5BQ9P2D3 2071 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 GOLGA8QA0A0J9YX86 632 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 A0A0J9YY10 115 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 GOLGA8OA6NCC3 632 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 GOLGA8NF8WBI6 632 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 H0YIV9 168 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 DUX1O43812 170 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 CBFA2T3O75081 653 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 PCNAP12004 261 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 CDH3P22223 829 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 DDX39BQ13838 428 aaKnown RBP23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 INAVAQ3KP66 663 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 FRG2Q64ET8 278 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 MED27Q6P2C8 311 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 TMIGD1Q6UXZ0 262 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 SPATA21Q7Z572 469 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 PIGWQ7Z7B1 504 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 FRG2BQ96QU4 278 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 AIF1LQ9BQI0 150 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 SLC29A3Q9BZD2 475 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 ELOVL6Q9H5J4 265 aa23.72■■□□□ 1.39
LDLRAD3-203ENST00000528989 ZNF292O60281 2723 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 SLC9B1P1A6NJY1 282 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 TNFSF14O43557 240 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 OR1F1O43749 312 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 CTSVO60911 334 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 RPLP0P05388 317 aaKnown RBP23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 ALOX15P16050 662 aaPredicted RBP23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 EPHA3P29320 983 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 NHLH1Q02575 133 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 PAGE2BQ5JRK9 111 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 SNAP47Q5SQN1 464 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 FBXO42Q6P3S6 717 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 PAQR7Q86WK9 346 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 HUS1BQ8NHY5 278 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 USP7Q93009 1102 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 C19orf60Q96EN9 201 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 RAB33BQ9H082 229 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 ZMYND15Q9H091 742 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 PSD3Q9NYI0 1048 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 KLHL14Q9P2G3 628 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 FTSJ1Q9UET6 329 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 VTI1BQ9UEU0 232 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 EPHA6Q9UF33 1036 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 SNX7Q9UNH6 387 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 SNX6Q9UNH7 406 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 PCDHGA11Q9Y5H2 935 aa23.71■■□□□ 1.39
LDLRAD3-203ENST00000528989 IGHV5-51A0A0C4DH38 117 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 SLCO1B7G3V0H7 640 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 DIAPH2O60879 1101 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 SH3BGRLO75368 114 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 STATHP02808 62 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 IDH3AP50213 366 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 REEP5Q00765 189 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 EPGNQ6UW88 154 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 OR2T11Q8NH01 316 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 ZNF473Q8WTR7 871 aaKnown RBP23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 SELENOMQ8WWX9 145 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 TRAPPC9Q96Q05 1148 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 SEMA6CQ9H3T2 930 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 SYNDIG1Q9H7V2 258 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 FAM60AQ9NP50 221 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 GIMAP2Q9UG22 337 aa23.7■■□□□ 1.39
LDLRAD3-203ENST00000528989 OR2A25A4D2G3 310 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 ZW10O43264 779 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 CHEK2O96017 543 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 KRT6AP02538 564 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 KRT6BP04259 564 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 BCL6P41182 706 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 KRT6CP48668 564 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 DUSP3P51452 185 aaPredicted RBP23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 CYP4F2P78329 520 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 CYP4F3Q08477 520 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 HIST2H2ACQ16777 129 aaPredicted RBP23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 STPG1Q5TH74 334 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 HIST2H2AA3Q6FI13 130 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 ZNF574Q6ZN55 896 aaPredicted RBP23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 VN1R5Q7Z5H4 357 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 LAS2Q8IYD9 372 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 KRT78Q8N1N4 520 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 AFAP1L2Q8N4X5 818 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 BAHD1Q8TBE0 780 aaPredicted RBP23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 ZUFSPQ96AP4 578 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 ZDHHC12Q96GR4 267 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 FAR2Q96K12 515 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 TMEM120AQ9BXJ8 343 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 LRRN3Q9H3W5 708 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 MEAF6Q9HAF1 191 aa23.7■■□□□ 1.38
LDLRAD3-203ENST00000528989 MAGEB17A8MXT2 336 aa23.69■■□□□ 1.38
LDLRAD3-203ENST00000528989 NDUFAB1O14561 156 aa23.69■■□□□ 1.38
LDLRAD3-203ENST00000528989 HGSO14964 777 aaPredicted RBP23.69■■□□□ 1.38
LDLRAD3-203ENST00000528989 HCRTR1O43613 425 aa23.69■■□□□ 1.38
LDLRAD3-203ENST00000528989 RASSF9O75901 435 aa23.69■■□□□ 1.38
LDLRAD3-203ENST00000528989 HMGCS1Q01581 520 aa23.69■■□□□ 1.38
LDLRAD3-203ENST00000528989 IFT88Q13099 833 aa23.69■■□□□ 1.38
LDLRAD3-203ENST00000528989 LAPTM5Q13571 262 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms