RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 UGT2A3Q6UWM9 527 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 SPRED1Q7Z699 444 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 PGBD3Q8N328 593 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 C1orf52Q8N6N3 182 aaKnown RBP14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 PANX1Q96RD7 426 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 AIF1LQ9BQI0 150 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 DUSP26Q9BV47 211 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 CHID1Q9BWS9 393 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 LGR4Q9BXB1 951 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 RHBGQ9H310 441 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 PRM3Q9NNZ6 103 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 ATP6V1HQ9UI12 483 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 ZFR2Q9UPR6 939 aaKnown RBP14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 SLC17A4Q9Y2C5 497 aa14.24□□□□□ -0.13
ECHDC1-220ENST00000528402 MYO9BQ13459 2157 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 RNF103-CHMP3A0A140T963 221 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 KRT87PA6NCN2 255 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 CACNB4O00305 520 aaPredicted RBP14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 CXCR6O00574 342 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 FPGTO14772 594 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 SCN2BO60939 215 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 RNGTTO60942 597 aaKnown RBP14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 EPN2O95208 641 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 TNFAIP8O95379 198 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 FAM58BPP0C7Q3 252 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 UBTFL6P0CB48 400 aaPredicted RBP14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 GLULP15104 373 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 GPX2P18283 190 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 GZMMP51124 257 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 SEC13P55735 322 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 ZNF763Q0D2J5 394 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 GRSF1Q12849 480 aaKnown RBP eCLIP14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 PLA2G4EQ3MJ16 856 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 SLC44A4Q53GD3 710 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 TMEM196Q5HYL7 178 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 CATSPEREQ5SY80 951 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 OR4F3Q6IEY1 312 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 TMIGD1Q6UXZ0 262 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 IKBIPQ70UQ0 350 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 FAM129CQ86XR2 697 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 METTL4Q8N3J2 472 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 ABHD11Q8NFV4 315 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 OR14C36Q8NHC7 312 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 DNASE1L2Q92874 299 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 FAM162AQ96A26 154 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 MSLNLQ96KJ4 702 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 EGLN2Q96KS0 407 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 RNF145Q96MT1 663 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 QRFPRQ96P65 431 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 CIB1Q99828 191 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 TRIM8Q9BZR9 551 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 BHLHE41Q9C0J9 482 aaPredicted RBP14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 REXO4Q9GZR2 422 aaKnown RBP14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 MVB12BQ9H7P6 319 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 WASH6PQ9NQA3 447 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 DMRT3Q9NQL9 472 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 MBNL1Q9NR56 388 aaKnown RBP14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 CLDND1Q9NY35 253 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 SLC23A2Q9UGH3 650 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 PADI4Q9UM07 663 aa14.23□□□□□ -0.13
ECHDC1-220ENST00000528402 TICRRQ7Z2Z1 1910 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 A0A1W2PQU0 124 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 DPPA5A6NC42 116 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 RNASET2O00584 256 aaKnown RBP14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 CLOCKO15516 846 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 PCDH7O60245 1069 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 CREG1O75629 220 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 SEMA3DO95025 777 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 PRSS23O95084 383 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 LRATO95237 230 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 CCNDBP1O95273 360 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 RASAL1O95294 804 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 HOXB2P14652 356 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 IDSP22304 550 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 PTPN6P29350 595 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 OXTRP30559 389 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 SOX9P48436 509 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 WNT3P56703 355 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 RAE1P78406 368 aaKnown RBP14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 PLIN5Q00G26 463 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 TSTA3Q13630 321 aaPredicted RBP14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 MYBPC3Q14896 1274 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 ADRM1Q16186 407 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 FBXO43Q4G163 708 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 OR52E8Q6IFG1 317 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 GCNT7Q6ZNI0 430 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 IL17RCQ8NAC3 791 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 DENND6BQ8NEG7 585 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 OR5AR1Q8NGP9 310 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 NUDT8Q8WV74 236 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 SNX19Q92543 992 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 FIG4Q92562 907 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 SCARF2Q96GP6 870 aaPredicted RBP14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 MSANTD3Q96H12 275 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 EBPLQ9BY08 206 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 PIF1Q9H611 641 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 REEP4Q9H6H4 257 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 MYNNQ9NPC7 610 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 CD320Q9NPF0 282 aa14.22□□□□□ -0.13
ECHDC1-220ENST00000528402 DCAF13Q9NV06 445 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms