RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	FBL	P22087	321 aa	Known RBP	11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	BCL6	P41182	706 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	RAPSN	Q13702	412 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	DSG2	Q14126	1118 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	WHAMMP3	Q1A5X7	153 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	GARNL3	Q5VVW2	1013 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	C8orf74	Q6P047	294 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	LCTL	Q6UWM7	567 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	C17orf64	Q86WR6	236 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	NKAP	Q8N5F7	415 aa	Known RBP	11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	AMER3	Q8N944	861 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	STT3B	Q8TCJ2	826 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	ANKRD7	Q92527	254 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	CDKL2	Q92772	493 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	COL26A1	Q96A83	441 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	NACC2	Q96BF6	587 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	MVB12A	Q96EY5	273 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	CPNE1	Q99829	537 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	MESP1	Q9BRJ9	268 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	HAUS8	Q9BT25	410 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	LRRC1	Q9BTT6	524 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	TRIM54	Q9BYV2	358 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	POPDC3	Q9HBV1	291 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	LRRC4C	Q9HCJ2	640 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	ZDHHC18	Q9NUE0	388 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	FBXL4	Q9UKA2	621 aa		11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	NOVA2	Q9UNW9	492 aa	Known RBP	11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	MTO1	Q9Y2Z2	717 aa	Known RBP	11.19	□□□□□ -0.62
PSMC3-205	ENST00000528362	SPEN	Q96T58	3664 aa	Known RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362		A0A0A6YYC8	382 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	FEZF1	A0PJY2	475 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	PABPN1L	A6NDY0	278 aa	Known RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362		I3L1I5	382 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	AGPS	O00116	658 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	TXNDC9	O14530	226 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	SOCS6	O14544	535 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	FFAR3	O14843	346 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	GPR42	O15529	346 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	ZGLP1	P0C6A0	271 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	GP5	P40197	560 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	MAGEA4	P43358	317 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	RPS15A	P62244	130 aa	Known RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	POU4F1	Q01851	419 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	KLC1	Q07866	573 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	ILF2	Q12905	390 aa	Known RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	TSN	Q15631	228 aa	Known RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	KIRREL2	Q6UWL6	708 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	PRSS58	Q8IYP2	241 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	TEX19	Q8NA77	164 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	CLEC1A	Q8NC01	280 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	ABHD11	Q8NFV4	315 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	ATL1	Q8WXF7	558 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	ZNF592	Q92610	1267 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	MIEF2	Q96C03	454 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	THAP11	Q96EK4	314 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	FER1L6-AS2	Q96M78	137 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	GPR22	Q99680	433 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	RBBP8	Q99708	897 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	MACROD1	Q9BQ69	325 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	UNK	Q9C0B0	810 aa	Known RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	DRC3	Q9H069	523 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	CAB39L	Q9H9S4	337 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	GPAM	Q9HCL2	828 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	SEMA3G	Q9NS98	782 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	GPR83	Q9NYM4	423 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	TXNDC16	Q9P2K2	825 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	CDC14A	Q9UNH5	594 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	ZNF451	Q9Y4E5	1061 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	OARD1	Q9Y530	152 aa		11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	SNRNP200	O75643	2136 aa	Known RBP	11.18	□□□□□ -0.62
PSMC3-205	ENST00000528362	FER1L5	A0AVI2	2057 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	PHGDH	O43175	533 aa	Known RBP	11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	LCMT2	O60294	686 aa	Known RBP	11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	ALOX12B	O75342	701 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	FAM155B	O75949	473 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	WISP1	O95388	367 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	IGHE	P01854	428 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	STX2	P32856	288 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	SLC26A3	P40879	764 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	SLC12A2	P55011	1212 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	CDKL1	Q00532	357 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	MEF2A	Q02078	507 aa	Predicted RBP	11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	GUCY2D	Q02846	1103 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	OCA2	Q04671	838 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	FAM53B	Q14153	422 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	USP10	Q14694	798 aa	Known RBP	11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.17	□□□□□ -0.62	2e-8	■■■■■ 57.6
PSMC3-205	ENST00000528362	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	RBBP7	Q16576	425 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	KBTBD12	Q3ZCT8	623 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	VWA2	Q5GFL6	755 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	VWA5B1	Q5TIE3	1220 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	TMEM214	Q6NUQ4	689 aa	Known RBP	11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	PRSS41	Q7RTY9	318 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	ADAMTSL2	Q86TH1	951 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	LAPTM4B	Q86VI4	370 aa		11.17	□□□□□ -0.62
PSMC3-205	ENST00000528362	CTAGE3P	Q8IX95	158 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms