RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ENGP17813 658 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 CRISP3P54108 245 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 PEX5LQ8IYB4 626 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 BPIFB6Q8NFQ5 453 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 ABTB1Q969K4 478 aaPredicted RBP14.59□□□□□ -0.07
USP47-207ENST00000527733 ASB9Q96DX5 294 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 GAL3ST4Q96RP7 486 aa14.59□□□□□ -0.07
USP47-207ENST00000527733 PRMT3O60678 531 aa14.58□□□□□ -0.07
USP47-207ENST00000527733 APOA1P02647 267 aa14.58□□□□□ -0.07
USP47-207ENST00000527733 RPL4P36578 427 aaKnown RBP14.58□□□□□ -0.07
USP47-207ENST00000527733 FOLH1Q04609 750 aa14.58□□□□□ -0.07
USP47-207ENST00000527733 IFI44LQ53G44 452 aa14.58□□□□□ -0.07
USP47-207ENST00000527733 GJD3Q8N144 294 aa14.58□□□□□ -0.07
USP47-207ENST00000527733 PIK3C3Q8NEB9 887 aa14.58□□□□□ -0.07
USP47-207ENST00000527733 FBXL8Q96CD0 374 aa14.58□□□□□ -0.07
USP47-207ENST00000527733 C17orf62Q9BQA9 187 aa14.58□□□□□ -0.07
USP47-207ENST00000527733 MEAF6Q9HAF1 191 aa14.58□□□□□ -0.07
USP47-207ENST00000527733 NEUROD4Q9HD90 331 aa14.58□□□□□ -0.07
USP47-207ENST00000527733 FAM149AA5PLN7 773 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 E7ENX8 843 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 MYL12BO14950 172 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 PDYNP01213 254 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 PBX2P40425 430 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 PGDP52209 483 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 PCBP2Q15366 365 aaKnown RBP eCLIP14.58□□□□□ -0.08
USP47-207ENST00000527733 SLC30A8Q8IWU4 369 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 ZNF563Q8TA94 476 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 GPR151Q8TDV0 419 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 DPH7Q9BTV6 452 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 PREBQ9HCU5 417 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 CLN6Q9NWW5 311 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 IFT80Q9P2H3 777 aaPredicted RBP14.58□□□□□ -0.08
USP47-207ENST00000527733 OR6C74A6NCV1 312 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 PRAMEF26H0Y7S4 382 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 TNFRSF11BO00300 401 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 GPR39O43194 453 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 SERPINA1P01009 418 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 ASGR2P07307 311 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 SFRP1Q8N474 314 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 PDP1Q9P0J1 537 aaPredicted RBP14.58□□□□□ -0.08
USP47-207ENST00000527733 FZD4Q9ULV1 537 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 POLR1DQ9Y2S0 133 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 DNAJC15Q9Y5T4 150 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 A8MU76 341 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 GFRA2O00451 464 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 PSMD4P55036 377 aaKnown RBP14.58□□□□□ -0.08
USP47-207ENST00000527733 SH3BP2P78314 561 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 PNCKQ6P2M8 343 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 C6orf89Q6UWU4 347 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 ZFAND4Q86XD8 727 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 ZDHHC21Q8IVQ6 265 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 TEX47Q8TBZ9 253 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 HCAR2Q8TDS4 363 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 ZDHHC12Q96GR4 267 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 CHID1Q9BWS9 393 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 RSPH9Q9H1X1 276 aaPredicted RBP14.58□□□□□ -0.08
USP47-207ENST00000527733 GPR34Q9UPC5 381 aa14.58□□□□□ -0.08
USP47-207ENST00000527733 DNMT3AQ9Y6K1 912 aaPredicted RBP14.58□□□□□ -0.08
USP47-207ENST00000527733 SCN2BO60939 215 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 NPPAP01160 153 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 XRCC1P18887 633 aaPredicted RBP14.57□□□□□ -0.08
USP47-207ENST00000527733 GSK3BP49841 420 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 TDGQ13569 410 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 PHF19Q5T6S3 580 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 PTCRAQ6ISU1 281 aaPredicted RBP14.57□□□□□ -0.08
USP47-207ENST00000527733 NXPE4Q6UWF7 544 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 Q8N9G6 341 aaPredicted RBP14.57□□□□□ -0.08
USP47-207ENST00000527733 RBM4BQ9BQ04 359 aaKnown RBP14.57□□□□□ -0.08
USP47-207ENST00000527733 RBM4Q9BWF3 364 aaKnown RBP14.57□□□□□ -0.08
USP47-207ENST00000527733 PRSS16Q9NQE7 514 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 GPRC5BQ9NZH0 403 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 ATXN10Q9UBB4 475 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 SERTAD3Q9UJW9 196 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 PRORSD1PA6NEY8 169 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 GPR89AB7ZAQ6 455 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 JUNP05412 331 aaKnown RBP14.57□□□□□ -0.08
USP47-207ENST00000527733 GPR89BP0CG08 455 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 RAP2AP10114 183 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 CDK3Q00526 305 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 GRB7Q14451 532 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 SLC44A4Q53GD3 710 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 ISLR2Q6UXK2 745 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 SLC38A4Q969I6 547 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 WBP2Q969T9 261 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 ZSWIM3Q96MP5 696 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 STOX2Q9P2F5 926 aaPredicted RBP14.57□□□□□ -0.08
USP47-207ENST00000527733 FADS3Q9Y5Q0 445 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 CLCA3PQ9Y6N3 262 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 LATO43561 262 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 IL7RP16871 459 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 NUDT1P36639 197 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 SEPHS1P49903 392 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 DSTNP60981 165 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 HTRA4P83105 476 aaPredicted RBP14.57□□□□□ -0.08
USP47-207ENST00000527733 PTGR1Q14914 329 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 NAIF1Q69YI7 327 aaPredicted RBP14.57□□□□□ -0.08
USP47-207ENST00000527733 ZNF730Q6ZMV8 503 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 RNF44Q7L0R7 432 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 ARL10Q8N8L6 244 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 RHBDF1Q96CC6 855 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms