RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 Q6ZPB1 254 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 RBFAQ8N0V3 343 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 CHCHD4Q8N4Q1 142 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ZBTB2Q8N680 514 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 OR6K2Q8NGY2 324 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 DNASE1L2Q92874 299 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 HSH2DQ96JZ2 352 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 CEP295NLQ96MC4 621 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 KCNC2Q96PR1 638 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 DPH2Q9BQC3 489 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 RMI1Q9H9A7 625 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 HCFC1R1Q9NWW0 138 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 THUMPD1Q9NXG2 353 aaKnown RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ARL15Q9NXU5 204 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 IL37Q9NZH6 218 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 CRLS1Q9UJA2 301 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 AGAP5A6NIR3 686 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 TEX28O15482 410 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 FGF18O76093 207 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 F11P03951 625 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 HSMCR30P0CW71 290 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 EFNA1P20827 205 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 HOXA9P31269 272 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 TGFBR2P37173 567 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 CTSKP43235 329 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 MAGEA11P43364 429 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 HNRNPFP52597 415 aaKnown RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 RHOAP61586 193 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 TUBA1BP68363 451 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 FADDQ13158 208 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 TPRG1LQ5T0D9 272 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 TUBA1AQ71U36 451 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ARMCX6Q7L4S7 300 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ZNF551Q7Z340 670 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ZNF558Q96NG5 402 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 CTRCQ99895 268 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 NTMT1Q9BV86 223 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 REXO4Q9GZR2 422 aaKnown RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 DNMT3LQ9UJW3 386 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 COL4A4P53420 1690 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 H7C0S8 307 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 FPGTO14772 594 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 EIF2S1P05198 315 aaKnown RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ANXA5P08758 320 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 PRPS2P11908 318 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 TCEA1P23193 301 aaKnown RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 KIR3DL1P43629 444 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 SGSHP51688 502 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 CDC20Q12834 499 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ZNF181Q2M3W8 571 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 VMACQ2NL98 169 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 PRSS36Q5K4E3 855 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 LACC1Q8IV20 430 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 EID2BQ96D98 161 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 EBPLQ9BY08 206 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 GABARAPL1Q9H0R8 117 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 THG1LQ9NWX6 298 aaKnown RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 PPT2Q9UMR5 302 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ILVBLA1L0T0 632 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 NUAK1O60285 661 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 WBP4O75554 376 aaKnown RBP12.11□□□□□ -0.47
CAPN1-208ENST00000527323 EPN2O95208 641 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 ITGALP20701 1170 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 AQP1P29972 269 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 CA5AP35218 305 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 CYP4F2P78329 520 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 ELP6Q0PNE2 266 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 CAMK2GQ13555 558 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-208ENST00000527323 DESI1Q6ICB0 168 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 CCDC71Q8IV32 467 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-208ENST00000527323 PLPP6Q8IY26 295 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 ELMOD1Q8N336 334 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 BEND7Q8N7W2 519 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-208ENST00000527323 TM6SF2Q9BZW4 377 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 ANKHQ9HCJ1 492 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 MAN2B2Q9Y2E5 1009 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 CAB39Q9Y376 341 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-208ENST00000527323 ZNF451Q9Y4E5 1061 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 METTL15A6NJ78 407 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 SPNP16150 400 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 PSMA3P25788 255 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 CTNNB1P35222 781 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 IDH2P48735 452 aaKnown RBP12.11□□□□□ -0.47
CAPN1-208ENST00000527323 RPIAP49247 311 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 NUDT6P53370 316 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 CYP4F8P98187 520 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 MTA1Q13330 715 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 TMEM240Q5SV17 173 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 ARMC12Q5T9G4 340 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 RSBN1Q5VWQ0 802 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-208ENST00000527323 TXNDC8Q6A555 127 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 ENTHD1Q8IYW4 607 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 NELL1Q92832 810 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 USP7Q93009 1102 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 APIPQ96GX9 242 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 TNKS2Q9H2K2 1166 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 SIRT5Q9NXA8 310 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 SPATA7Q9P0W8 599 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 SNX6Q9UNH7 406 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms