RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CLDN9O95484 217 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 TSPAN8P19075 237 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 BGNP21810 368 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 ID4P47928 161 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 PKNOX1P55347 436 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 RPS15AP62244 130 aaKnown RBP15.83■□□□□ 0.12
CAPN1-205ENST00000526954 ACY1Q03154 408 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 TARDBPQ13148 414 aaKnown RBP eCLIP15.83■□□□□ 0.12
CAPN1-205ENST00000526954 RCN2Q14257 317 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 KCNAB1Q14722 419 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 PAGE2BQ5JRK9 111 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 GRHL2Q6ISB3 625 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 ZCCHC23Q6ZST2 131 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 MILR1Q7Z6M3 343 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 TRIM42Q8IWZ5 723 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 TBC1D19Q8N5T2 526 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 BMPERQ8N8U9 685 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 OR4F6Q8NGB9 312 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 OR2A5Q96R48 311 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 ZFYVE21Q9BQ24 234 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 SPNS1Q9H2V7 528 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 TRPS1Q9UHF7 1281 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 ZNF225Q9UK10 706 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 RNF11Q9Y3C5 154 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 PCDHGA4Q9Y5G9 962 aa15.83■□□□□ 0.12
CAPN1-205ENST00000526954 A0A1B0GTL3 188 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 TMEM114B3SHH9 223 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 B4E171 279 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 UBFD1O14562 309 aaKnown RBP15.82■□□□□ 0.12
CAPN1-205ENST00000526954 KLF11O14901 512 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 LCMT2O60294 686 aaKnown RBP15.82■□□□□ 0.12
CAPN1-205ENST00000526954 SRPX2O60687 465 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-205ENST00000526954 ESRRBO95718 433 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 NEFHP12036 1026 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 FOLR1P15328 257 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 GSTM2P28161 218 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 BCL6P41182 706 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 TSPAN7P41732 249 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 CCR10P46092 362 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 SCTRP47872 440 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 ERVPABLB-1P60509 514 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 SH3BP2P78314 561 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 MEF2AQ02078 507 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-205ENST00000526954 SLBPQ14493 270 aaKnown RBP eCLIP15.82■□□□□ 0.12
CAPN1-205ENST00000526954 CES4AQ5XG92 561 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 LETMD1Q6P1Q0 360 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 TMIGD1Q6UXZ0 262 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 GPRIN3Q6ZVF9 776 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 SYVN1Q86TM6 617 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 BPHLQ86WA6 291 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-205ENST00000526954 MCATQ8IVS2 390 aaKnown RBP15.82■□□□□ 0.12
CAPN1-205ENST00000526954 LAS2Q8IYD9 372 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 LSMEM2Q8N112 164 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 CHCHD4Q8N4Q1 142 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 MFSD9Q8NBP5 474 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 ZNF740Q8NDX6 193 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 PPP1R14CQ8TAE6 165 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 AGAP11Q8TF27 550 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 UBE2E3Q969T4 207 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 SEC16BQ96JE7 1060 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 ZNF285Q96NJ3 590 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 CDK15Q96Q40 435 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 MANSC1Q9H8J5 431 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 OCIAD1Q9NX40 245 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 ZNF490Q9ULM2 529 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-205ENST00000526954 PLCL2Q9UPR0 1127 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 TSC22D4Q9Y3Q8 395 aa15.82■□□□□ 0.12
CAPN1-205ENST00000526954 A0A0J9YVX5 310 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 FEZF1A0PJY2 475 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 EFCAB7A8K855 629 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 H0YIV9 168 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 HCRTR1O43613 425 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 OR1F1O43749 312 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 SNUPNO95149 360 aaKnown RBP15.81■□□□□ 0.12
CAPN1-205ENST00000526954 ENO1P06733 434 aaKnown RBP15.81■□□□□ 0.12
CAPN1-205ENST00000526954 ARRB2P32121 409 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 AHRP35869 848 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 MC2RQ01718 297 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 STX3Q13277 289 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 IL11RAQ14626 422 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 HIST2H2ACQ16777 129 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-205ENST00000526954 ARL13AQ5H913 290 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-205ENST00000526954 HIST2H2AA3Q6FI13 130 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 MED27Q6P2C8 311 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 CYB5D1Q6P9G0 228 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 RAB11FIP2Q7L804 512 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 PLD3Q8IV08 490 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 TTLQ8NG68 377 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 OR8K5Q8NH50 307 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 WDR36Q8NI36 951 aaKnown RBP15.81■□□□□ 0.12
CAPN1-205ENST00000526954 ZNF501Q96CX3 271 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-205ENST00000526954 DCHS1Q96JQ0 3298 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 RHBGQ9H310 441 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 SYNPO2LQ9H987 977 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 EML4Q9HC35 981 aaKnown RBP15.81■□□□□ 0.12
CAPN1-205ENST00000526954 MID1IP1Q9NPA3 183 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 FBXO8Q9NRD0 319 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 FGF21Q9NSA1 209 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 LOXL2Q9Y4K0 774 aa15.81■□□□□ 0.12
CAPN1-205ENST00000526954 PCDHGA11Q9Y5H2 935 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms