RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SNX7Q9UNH6 387 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 CCDC151A5D8V7 595 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 F8W8V4 182 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 EIF3FO00303 357 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-204ENST00000526430 CDC7O00311 574 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 BTN3A3O00478 584 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 RASSF9O75901 435 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 UBXN7O94888 489 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 VIPP01282 170 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 CD1DP15813 335 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 STMN1P16949 149 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 HALP42357 657 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 BDKRB1P46663 353 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 RAB10P61026 200 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 IRF9Q00978 393 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 MYBPC3Q14896 1274 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 PHKG1Q16816 387 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 UGT3A1Q6NUS8 523 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 SBSNQ6UWP8 590 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 UNC5DQ6UXZ4 953 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 ISCA2Q86U28 154 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 PARP9Q8IXQ6 854 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 TBC1D21Q8IYX1 336 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 ADGRF3Q8IZF5 1079 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 ZADH2Q8N4Q0 377 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 LINC01555Q8NAE3 123 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 FBXO15Q8NCQ5 510 aaPredicted RBP10.47□□□□□ -0.73
NEDD8-204ENST00000526430 OR52E1Q8NGJ3 308 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 CFAP61Q8NHU2 1237 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 LINGO1Q96FE5 620 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 SLC41A2Q96JW4 573 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 LRFN5Q96NI6 719 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 IL17FQ96PD4 163 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 SLX1AQ9BQ83 275 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 NLNQ9BYT8 704 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 RAB33BQ9H082 229 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 XKR8Q9H6D3 395 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 MVB12BQ9H7P6 319 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 GPAMQ9HCL2 828 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 SNX15Q9NRS6 342 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 ZNF358Q9NW07 568 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 CIDEBQ9UHD4 219 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 PLAGL1Q9UM63 463 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 ICKQ9UPZ9 632 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 PDE10AQ9Y233 779 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 ASF1AQ9Y294 204 aa10.47□□□□□ -0.73
NEDD8-204ENST00000526430 A0A1W2PPV9 198 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 TRIM49D1C9J1S8 452 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 MYO1CO00159 1063 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 ZBTB14O43829 449 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 INHBAP08476 426 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 SNRPAP09012 282 aaKnown RBP10.46□□□□□ -0.73
NEDD8-204ENST00000526430 SBK3P0C264 359 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 CCDC166P0CW27 439 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 ERGP11308 486 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 ENO3P13929 434 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-204ENST00000526430 PEBP1P30086 187 aaKnown RBP10.46□□□□□ -0.73
NEDD8-204ENST00000526430 TSFMP43897 325 aaKnown RBP10.46□□□□□ -0.73
NEDD8-204ENST00000526430 SLCO1A2P46721 670 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 CAPZBP47756 277 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 SERPINB9P50453 376 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 IL2P60568 153 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 PPP1CAP62136 330 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 YBX1P67809 324 aaKnown RBP10.46□□□□□ -0.73
NEDD8-204ENST00000526430 ILF2Q12905 390 aaKnown RBP10.46□□□□□ -0.73
NEDD8-204ENST00000526430 PDAP1Q13442 181 aaKnown RBP10.46□□□□□ -0.73
NEDD8-204ENST00000526430 RAPSNQ13702 412 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 FASTKQ14296 549 aaKnown RBP10.46□□□□□ -0.73
NEDD8-204ENST00000526430 TMED2Q15363 201 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 PPP1R3AQ16821 1122 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 SYTL3Q4VX76 610 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 TNFAIP8L3Q5GJ75 292 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 CACHD1Q5VU97 1274 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 FCRL6Q6DN72 434 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 MTFR2Q6P444 385 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 RPTNQ6XPR3 784 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 OR4E2Q8NGC2 313 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 GRHL3Q8TE85 626 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 ANKRD7Q92527 254 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 RSC1A1Q92681 617 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 MR1Q95460 341 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 NXNL1Q96CM4 212 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 CXorf40BQ96DE9 158 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 ZDHHC12Q96GR4 267 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 PPM1MQ96MI6 270 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 PKP4Q99569 1192 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 DERL2Q9GZP9 239 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 ZNF552Q9H707 407 aaPredicted RBP10.46□□□□□ -0.73
NEDD8-204ENST00000526430 SYTL2Q9HCH5 934 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 TXNDC16Q9P2K2 825 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 SUCOQ9UBS9 1254 aaKnown RBP10.46□□□□□ -0.73
NEDD8-204ENST00000526430 EPHA6Q9UF33 1036 aa10.46□□□□□ -0.73
NEDD8-204ENST00000526430 JMJD1CQ15652 2540 aa10.46□□□□□ -0.74
NEDD8-204ENST00000526430 A0A096LPK6 155 aa10.45□□□□□ -0.74
NEDD8-204ENST00000526430 TARM1B6A8C7 271 aa10.45□□□□□ -0.74
NEDD8-204ENST00000526430 AGPSO00116 658 aa10.45□□□□□ -0.74
NEDD8-204ENST00000526430 IFRD1O00458 451 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-204ENST00000526430 SLC16A5O15375 505 aa10.45□□□□□ -0.74
NEDD8-204ENST00000526430 KIF1CO43896 1103 aaKnown RBP10.45□□□□□ -0.74
NEDD8-204ENST00000526430 KLK3P07288 261 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms