RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 SLC5A11Q8WWX8 675 aa11.77□□□□□ -0.52
CTTN-210ENST00000525852 LRFN5Q96NI6 719 aa11.77□□□□□ -0.52
CTTN-210ENST00000525852 SLC7A5P2Q9GIP4 190 aa11.77□□□□□ -0.52
CTTN-210ENST00000525852 NUDT4Q9NZJ9 180 aa11.77□□□□□ -0.52
CTTN-210ENST00000525852 DHCR7Q9UBM7 475 aaKnown RBP11.77□□□□□ -0.52
CTTN-210ENST00000525852 RALYQ9UKM9 306 aaKnown RBP11.77□□□□□ -0.52
CTTN-210ENST00000525852 PCDHGA4Q9Y5G9 962 aa11.77□□□□□ -0.52
CTTN-210ENST00000525852 MRPS18BQ9Y676 258 aaKnown RBP11.77□□□□□ -0.52
CTTN-210ENST00000525852 K7ENP7 123 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 MAP2K7O14733 419 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 P2RX6O15547 441 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 LCMT2O60294 686 aaKnown RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 S100BP04271 92 aaPredicted RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 HBQ1P09105 142 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 ATXN8OSP0DMR3 200 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 COL6A2P12110 1019 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 ITGAXP20702 1163 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 DLSTP36957 453 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 BCL6P41182 706 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 CCR8P51685 355 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 UCNP55089 124 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 CYP4F2P78329 520 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 GRM7Q14831 915 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 HKDC1Q2TB90 917 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 PRTGQ2VWP7 1150 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 TECRLQ5HYJ1 363 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 FAM69BQ5VUD6 431 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 INO80CQ6PI98 192 aaPredicted RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 VN1R4Q7Z5H5 301 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 TDRPQ86YL5 185 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 ZNF740Q8NDX6 193 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 MR1Q95460 341 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 GBP5Q96PP8 586 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 NDC1Q9BTX1 674 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 CHST8Q9H2A9 424 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 SPNS1Q9H2V7 528 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 CNOT10Q9H9A5 744 aaKnown RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 GPN2Q9H9Y4 310 aaPredicted RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 SRPK3Q9UPE1 567 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 DYRK1BQ9Y463 629 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 PIEZO2Q9H5I5 2752 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 A0A1W2PPM1 405 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 CCDC189A1A4V9 331 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 HYKKA2RU49 373 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 SYCE1LA8MT33 242 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 GOLGA8RI6L899 631 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 STK16O75716 305 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 IPO13O94829 963 aaKnown RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 KLK3P07288 261 aaPredicted RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 CAPN1P07384 714 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 NUDT17P0C025 328 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 TCN2P20062 427 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 VARSP26640 1264 aaKnown RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 RPS15AP62244 130 aaKnown RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 SNRPNP63162 240 aaKnown RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 NFKB2Q00653 900 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 CDC16Q13042 620 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 NXPE4Q6UWF7 544 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 FAM198BQ6UWH4 519 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 TTLL10Q6ZVT0 673 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 ARHGEF39Q8N4T4 335 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 CSNK1A1LQ8N752 337 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 TTC29Q8NA56 475 aaPredicted RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 UBTD2Q8WUN7 234 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 RERGQ96A58 199 aaPredicted RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 KIAA1143Q96AT1 154 aaPredicted RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 SCYL1Q96KG9 808 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 C10orf90Q96M02 699 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 MACROD1Q9BQ69 325 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 CD244Q9BZW8 370 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 PELI2Q9HAT8 420 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 CUTCQ9NTM9 273 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 DNAJC11Q9NVH1 559 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 XPR1Q9UBH6 696 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 RUVBL1Q9Y265 456 aaKnown RBP11.76□□□□□ -0.53
CTTN-210ENST00000525852 KCNE2Q9Y6J6 123 aa11.76□□□□□ -0.53
CTTN-210ENST00000525852 KCNE1BA0A087WTH5 132 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 LRRC14BA6NHZ5 514 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 KLK8O60259 260 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 CCNT2O60583 730 aaKnown RBP11.75□□□□□ -0.53
CTTN-210ENST00000525852 PRAMEF4O60810 478 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 SBK3P0C264 359 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 PYGBP11216 843 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 EPORP19235 508 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 ALAS2P22557 587 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 ARSFP54793 590 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 FOXL2P58012 376 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 RPS18P62269 152 aaKnown RBP11.75□□□□□ -0.53
CTTN-210ENST00000525852 DNASE1L3Q13609 305 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 SLC9A5Q14940 896 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 PFKFB4Q16877 469 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 TSNAXIP1Q2TAA8 658 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 PRAMEF9Q5VWM5 478 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 SLCO4C1Q6ZQN7 724 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 TMPRSS11BQ86T26 416 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 TMEM151BQ8IW70 566 aa11.75□□□□□ -0.53
CTTN-210ENST00000525852 TMEM151AQ8N4L1 468 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms