RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CALM3P0DP25 149 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 KCNE1P15382 129 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CEBPBP17676 345 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 TYMPP19971 482 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 MUTP22033 750 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 BDKRB2P30411 391 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ELF1P32519 619 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ABCD1P33897 745 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CHKAP35790 457 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 PI4KAP42356 2102 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 MATKP42679 507 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 FASLGP48023 281 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 TUFMP49411 452 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 HOXA1P49639 335 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 ACADVLP49748 655 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CLK1P49759 484 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 TUBP50607 506 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 DUSP3P51452 185 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 NLRP11P59045 1033 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 ROR1Q01973 937 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ZNF33AQ06730 810 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SPOCK1Q08629 439 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 GRIK2Q13002 908 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ITGB3BPQ13352 177 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 DRP2Q13474 957 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 TRIM14Q14142 442 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 TFDP1Q14186 410 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 NAA25Q14CX7 972 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SLC1A5Q15758 541 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 KYAT1Q16773 422 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 UPP1Q16831 310 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 TMEM266Q2M3C6 531 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 DCAF4L1Q3SXM0 396 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ZC2HC1CQ53FD0 456 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 ZNF766Q5HY98 468 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 TECRLQ5HYJ1 363 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 PDSS1Q5T2R2 415 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SPINK14Q6IE38 97 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 TCEAL6Q6IPX3 200 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 FAM171BQ6P995 826 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SLC27A1Q6PCB7 646 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 MFSD6Q6ZSS7 791 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ANO5Q75V66 913 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 TRPT1Q86TN4 253 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 GPAT4Q86UL3 456 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 GTSCR1Q86UQ5 136 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CCDC60Q8IWA6 550 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 DSELQ8IZU8 1212 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CMTM8Q8IZV2 173 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 MYCT1Q8N699 235 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ZNF557Q8N988 423 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 KNL1Q8NG31 2342 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 HUS1BQ8NHY5 278 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 HMGCLL1Q8TB92 370 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ZNF564Q8TBZ8 553 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 ZNF473Q8WTR7 871 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 CCDC12Q8WUD4 166 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 KCNE4Q8WWG9 221 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 PSPC1Q8WXF1 523 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 TCEAL3Q969E4 200 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 PIGTQ969N2 578 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 FAM131CQ96AQ9 280 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SGF29Q96ES7 293 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CCDC136Q96JN2 1154 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 NAP1L4Q99733 375 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 SH3GL2Q99962 352 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 DCTN5Q9BTE1 182 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 FAM49AQ9H0Q0 323 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 NXF3Q9H4D5 531 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 TFB2MQ9H5Q4 396 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 DHX33Q9H6R0 707 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 PSTPIP2Q9H939 334 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 FKRPQ9H9S5 495 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 POLR1BQ9H9Y6 1135 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SEBOXQ9HB31 216 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 ASCL3Q9NQ33 180 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SLC52A3Q9NQ40 469 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 HINT3Q9NQE9 182 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 C20orf141Q9NUB4 165 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 PRMT7Q9NVM4 692 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 PAK5Q9P286 719 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SLC25A10Q9UBX3 287 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 DNAJB4Q9UDY4 337 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SEC63Q9UGP8 760 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 MAD2L2Q9UI95 211 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ACAD8Q9UKU7 415 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 DDX19BQ9UMR2 479 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 NDRG2Q9UN36 371 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 ARHGAP26Q9UNA1 814 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ENTPD4Q9Y227 616 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 PIN4Q9Y237 131 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 KCNK7Q9Y2U2 307 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 PRSS21Q9Y6M0 314 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CRYBG3Q68DQ2 2970 aa1.53□□□□□ -2.17
CD44-212ENST00000524922 TACC2O95359 2948 aa1.53□□□□□ -2.17
CD44-212ENST00000524922 MGAM2Q2M2H8 2515 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 RALGAPA1Q6GYQ0 2036 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 NUP205Q92621 2012 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 MYH7P12883 1935 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 NUP210Q8TEM1 1887 aaPredicted RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms