RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 OR2L3Q8NG85 312 aa13.01□□□□□ -0.33
NKX3-1-202ENST00000523261 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.01□□□□□ -0.33
NKX3-1-202ENST00000523261 C19orf43Q9BQ61 176 aa13.01□□□□□ -0.33
NKX3-1-202ENST00000523261 PLCD4Q9BRC7 762 aa13.01□□□□□ -0.33
NKX3-1-202ENST00000523261 DRC3Q9H069 523 aa13.01□□□□□ -0.33
NKX3-1-202ENST00000523261 OR2W5A6NFC9 320 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 SOWAHDA6NJG2 315 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 C3orf70A6NLC5 250 aaPredicted RBP13□□□□□ -0.33
NKX3-1-202ENST00000523261 KLRC4-KLRK1H3BQV0 150 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 PEX1O43933 1283 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 FTH1P02794 183 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 TACR1P25103 407 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 TRHRP34981 398 aaPredicted RBP13□□□□□ -0.33
NKX3-1-202ENST00000523261 ARHGAP25P42331 645 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 AGTR2P50052 363 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 HLCSP50747 726 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 MESDQ14696 234 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 MINDY4Q4G0A6 757 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 MFSD4BQ5TF39 518 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 ZNF585AQ6P3V2 769 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 TAS2R42Q7RTR8 314 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 PIANPQ8IYJ0 282 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 SLC22A15Q8IZD6 547 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 ZNF567Q8N184 647 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 LRRC75A-AS1Q8N1F1 130 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 CSNK1A1LQ8N752 337 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 ZNF592Q92610 1267 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 SLCO2A1Q92959 643 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 SH3GL2Q99962 352 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 DEFB127Q9H1M4 99 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 SMARCAL1Q9NZC9 954 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 AIPL1Q9NZN9 384 aa13□□□□□ -0.33
NKX3-1-202ENST00000523261 KLHL8Q9P2G9 620 aaPredicted RBP13□□□□□ -0.33
NKX3-1-202ENST00000523261 LIMA1Q9UHB6 759 aaKnown RBP13□□□□□ -0.33
NKX3-1-202ENST00000523261 A0A1W2PPR1 153 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 LRRD1A4D1F6 860 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 QSOX1O00391 747 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 PROSCO94903 275 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 CRTAMO95727 393 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 RPN2P04844 631 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 EPXP11678 715 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 CSE1LP55060 971 aaKnown RBP12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 SNRPNP63162 240 aaKnown RBP12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 TYRO3Q06418 890 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 KLHL30Q0D2K2 578 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 SFT2D3Q587I9 215 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 PODNL1Q6PEZ8 512 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 PAOXQ6QHF9 649 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 PRSS57Q6UWY2 283 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 RANBP10Q6VN20 620 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 VRK3Q8IV63 474 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 OR2A1Q8NGT9 310 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 ATG10Q9H0Y0 220 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 B4GALT7Q9UBV7 327 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 SLC39A10Q9ULF5 831 aa12.99□□□□□ -0.33
NKX3-1-202ENST00000523261 A0A0U1RQJ8 604 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 A0A1W2PPV9 198 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 OR14I1A6ND48 311 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 BCKDKO14874 412 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 SKILP12757 684 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 ZFXP17010 805 aaPredicted RBP12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 ADRA1AP35348 466 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 MLF1P58340 268 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 SLC26A5P58743 744 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 GPR85P60893 370 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 FAM53BQ14153 422 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 USP10Q14694 798 aaKnown RBP12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 FBXL19-AS1Q494R0 122 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 KAZNQ674X7 775 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 PID1Q7Z2X4 250 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 VSIG1Q86XK7 387 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 KIF2BQ8N4N8 673 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 RELL2Q8NC24 303 aaPredicted RBP12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 CFAP61Q8NHU2 1237 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 ELP5Q8TE02 316 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 TFB1MQ8WVM0 346 aaKnown RBP12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 RNASE6Q93091 150 aaKnown RBP12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 DNAJC1Q96KC8 554 aaKnown RBP12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 SMC6Q96SB8 1091 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 LPAR4Q99677 370 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 APOL2Q9BQE5 337 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 GORASP1Q9BQQ3 440 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 DPH7Q9BTV6 452 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 RAB11FIP5Q9BXF6 653 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 IMPACTQ9P2X3 320 aa12.98□□□□□ -0.33
NKX3-1-202ENST00000523261 HEATR5BQ9P2D3 2071 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 CLCA1A8K7I4 914 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 ARHGEF33A8MVX0 844 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 H7C0S8 307 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 GOSR1O95249 250 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 HRGP04196 525 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 ASCL1P50553 236 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 DYNLT1P63172 113 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 PTK6Q13882 451 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 CATSPEREQ5SY80 951 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 RIPPLY2Q5TAB7 128 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 PACS1Q6VY07 963 aa12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 APTXQ7Z2E3 356 aaKnown RBP12.97□□□□□ -0.33
NKX3-1-202ENST00000523261 YTHDF3Q7Z739 585 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms