RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ABHD11Q8NFV4 315 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 RAB3IL1Q8TBN0 382 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 ZNF75CPQ92670 426 aaPredicted RBP11.45□□□□□ -0.58
PVT1-215ENST00000522963 RNF31Q96EP0 1072 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 ZNF578Q96N58 590 aaPredicted RBP11.45□□□□□ -0.58
PVT1-215ENST00000522963 TRAPPC9Q96Q05 1148 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 CDK15Q96Q40 435 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 ZNF382Q96SR6 550 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 CD180Q99467 661 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 DPH7Q9BTV6 452 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 CAPS2Q9BXY5 557 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 SHCBP1LQ9BZQ2 653 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 C20orf27Q9GZN8 174 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 DRC3Q9H069 523 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 MANSC1Q9H8J5 431 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 PELI2Q9HAT8 420 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 ASCL3Q9NQ33 180 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 SLC39A1Q9NY26 324 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 ZNF225Q9UK10 706 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 PCDHGA8Q9Y5G5 932 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 SPEGQ15772 3267 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 AHCTF1Q8WYP5 2266 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 ANKRD12Q6UB98 2062 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 IGHV5-51A0A0C4DH38 117 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 SLC9B1P1A6NJY1 282 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 SRRM3A6NNA2 597 aaPredicted RBP11.44□□□□□ -0.58
PVT1-215ENST00000522963 TMEM114B3SHH9 223 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 H7BY64 318 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 POLR3GO15318 223 aaPredicted RBP11.44□□□□□ -0.58
PVT1-215ENST00000522963 SNNO75324 88 aaPredicted RBP11.44□□□□□ -0.58
PVT1-215ENST00000522963 MLYCDO95822 493 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 OTCP00480 354 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 C1GALT1C1LP0DN25 315 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 ST6GAL1P15907 406 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 CD22P20273 847 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 MAGP20916 626 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 GRK2P25098 689 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 SERPINB5P36952 375 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 MDH1P40925 334 aaKnown RBP11.44□□□□□ -0.58
PVT1-215ENST00000522963 CASP2P42575 452 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 SLC1A6P48664 564 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 ARL4DP49703 201 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 CCR8P51685 355 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 PCBP4P57723 403 aaKnown RBP11.44□□□□□ -0.58
PVT1-215ENST00000522963 ERVPABLB-1P60509 514 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 ABCE1P61221 599 aaKnown RBP11.44□□□□□ -0.58
PVT1-215ENST00000522963 SH3BP2P78314 561 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 CSNK1G2P78368 415 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 MEF2AQ02078 507 aaPredicted RBP11.44□□□□□ -0.58
PVT1-215ENST00000522963 GUCY1A3Q02108 690 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 IRF8Q02556 426 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 FOXM1Q08050 763 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 DOC2AQ14183 400 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 E2F2Q14209 437 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 ZIC1Q15915 447 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 XKR6Q5GH73 641 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 ARL13AQ5H913 290 aaPredicted RBP11.44□□□□□ -0.58
PVT1-215ENST00000522963 ATG16L1Q676U5 607 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 FCRL6Q6DN72 434 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 ZNF425Q6IV72 752 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 LETMD1Q6P1Q0 360 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 LRRC69Q6ZNQ3 347 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 PRSS42Q7Z5A4 293 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 ARHGAP22Q7Z5H3 698 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 PAQR7Q86WK9 346 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 OR4F6Q8NGB9 312 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 OR4K1Q8NGD4 311 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 AGAP11Q8TF27 550 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 ATP6V1E2Q96A05 226 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 WDR34Q96EX3 536 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 MAGEB18Q96M61 343 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 PRAP1Q96NZ9 151 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 CTRCQ99895 268 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 PLCD4Q9BRC7 762 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 TRMOQ9BU70 441 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 NTMT1Q9BV86 223 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 SPNS1Q9H2V7 528 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 ACTR8Q9H981 624 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 TNFRSF12AQ9NP84 129 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 C1GALT1Q9NS00 363 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 TMEM184CQ9NVA4 438 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 SEMA5BQ9P283 1151 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 PDP2Q9P2J9 529 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 DKK4Q9UBT3 224 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 RNF11Q9Y3C5 154 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 KLK4Q9Y5K2 254 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 CACNA1BQ00975 2339 aa11.44□□□□□ -0.58
PVT1-215ENST00000522963 KCNE1BA0A087WTH5 132 aa11.43□□□□□ -0.58
PVT1-215ENST00000522963 OR2A25A4D2G3 310 aa11.43□□□□□ -0.58
PVT1-215ENST00000522963 KLF11O14901 512 aa11.43□□□□□ -0.58
PVT1-215ENST00000522963 RRP8O43159 456 aaKnown RBP11.43□□□□□ -0.58
PVT1-215ENST00000522963 WFS1O76024 890 aa11.43□□□□□ -0.58
PVT1-215ENST00000522963 DXOO77932 396 aaKnown RBP11.43□□□□□ -0.58
PVT1-215ENST00000522963 OR4F21O95013 312 aa11.43□□□□□ -0.58
PVT1-215ENST00000522963 HSPA4LO95757 839 aa11.43□□□□□ -0.58
PVT1-215ENST00000522963 EBLN1P0CF75 366 aa11.43□□□□□ -0.58
PVT1-215ENST00000522963 HRH2P25021 359 aa11.43□□□□□ -0.58
PVT1-215ENST00000522963 ARL1P40616 181 aaPredicted RBP11.43□□□□□ -0.58
PVT1-215ENST00000522963 EIF2S3P41091 472 aaKnown RBP11.43□□□□□ -0.58
PVT1-215ENST00000522963 PKNOX1P55347 436 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms