RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PRSS57Q6UWY2 283 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 UNC5DQ6UXZ4 953 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 ZC3H7AQ8IWR0 971 aaKnown RBP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 GALNT12Q8IXK2 581 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 LGI4Q8N135 537 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 ARHGEF39Q8N4T4 335 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 C2orf73Q8N5S3 287 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 TTC29Q8NA56 475 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 OR10Q1Q8NGQ4 319 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 C16orf52Q8NHV5 167 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 ALKBH8Q96BT7 664 aaKnown RBP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 SH3GL2Q99962 352 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 SLC25A51Q9H1U9 297 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 TRABDQ9H4I3 376 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 TRIM45Q9H8W5 580 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 ZC3H7BQ9UGR2 993 aaKnown RBP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 LINC01387J3KSC0 135 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 SRP72O76094 671 aaKnown RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 HRGP04196 525 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 ATP1B2P14415 290 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 FBLP22087 321 aaKnown RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 ACVR2AP27037 513 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 UQCRC1P31930 480 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 CD68P34810 354 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 AP2B1P63010 937 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 OC90Q02509 493 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 RUNX1T1Q06455 604 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 RPA4Q13156 261 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 CAPRIN1Q14444 709 aaKnown RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 GRB7Q14451 532 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 MESDQ14696 234 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 SETDB1Q15047 1291 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 SLC14A2Q15849 920 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 PRTGQ2VWP7 1150 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 SLC25A35Q3KQZ1 300 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 FIGNQ5HY92 759 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 ARHGAP11AQ6P4F7 1023 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 YTHDF3Q7Z739 585 aaKnown RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 CPNE8Q86YQ8 564 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 SULF2Q8IWU5 870 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 TBC1D21Q8IYX1 336 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 LRRC75A-AS1Q8N1F1 130 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 RELL2Q8NC24 303 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 CCNYQ8ND76 341 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 OR5M9Q8NGP3 310 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 OR5M3Q8NGP4 307 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 OR5K2Q8NHB8 316 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 SRPK1Q96SB4 655 aaKnown RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 CYTH2Q99418 400 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 BHLHE41Q9C0J9 482 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 VN1R1Q9GZP7 353 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 ASB8Q9H765 288 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 KCNK13Q9HB14 408 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 ADGRE2Q9UHX3 823 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 ASF1AQ9Y294 204 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 TDRKHQ9Y2W6 561 aaKnown RBP8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 ALG6Q9Y672 507 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 NBEAL2Q6ZNJ1 2754 aa8.32□□□□□ -1.08
TRAPPC9-212ENST00000521944 IGLV3-16A0A075B6K0 115 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 NPIPA2E9PIF3 369 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 NPIPA3F8WFD2 350 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 CLDN4O14493 209 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 TFECO14948 347 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 FOXS1O43638 330 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 SRPX2O60687 465 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 SUN1O94901 812 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 C8orf89P0DMQ9 161 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 TACR1P25103 407 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 MAPK1P28482 360 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 PKLRP30613 574 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 CDKN1CP49918 316 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 WNT3AP56704 352 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 MAT1AQ00266 395 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 ZC3H12BQ5HYM0 836 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 KAZNQ674X7 775 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 FBXO42Q6P3S6 717 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 POMZP3Q6PJE2 187 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 SHISA2Q6UWI4 295 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 IRF2BP2Q7Z5L9 587 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 CPEB2Q7Z5Q1 589 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 WDR53Q7Z5U6 358 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 P3H2Q8IVL5 708 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 SLC25A41Q8N5S1 370 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 CLDN19Q8N6F1 224 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 ZFP62Q8NB50 900 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 FAM98AQ8NCA5 519 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 LINC01560Q8TB33 94 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 FAF2Q96CS3 445 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 IL17FQ96PD4 163 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 DEFB127Q9H1M4 99 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 FAM96AQ9H5X1 160 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 GLOD4Q9HC38 313 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 MMP25Q9NPA2 562 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 LUC7LQ9NQ29 371 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 C14orf105Q9NVL8 296 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 HAUS2Q9NVX0 235 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 CIDEBQ9UHD4 219 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 ARL5AQ9Y689 179 aa8.31□□□□□ -1.08
TRAPPC9-212ENST00000521944 KIAA1549Q9HCM3 1950 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms