RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PITPNAQ00169 270 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 IRF9Q00978 393 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 AGTRAPQ6RW13 159 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 ADGRG6Q86SQ4 1221 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 ZNF354BQ96LW1 612 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 SLC22A14Q9Y267 594 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 CLCA3PQ9Y6N3 262 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 TCRBV21S2A2A0A5A6 115 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 OR5K4A6NMS3 321 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 ERI3O43414 337 aaKnown RBP15.74■□□□□ 0.11
USP42-207ENST00000521713 OR5F1O95221 314 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 NTSR1P30989 418 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 KCNC3Q14003 757 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 THOC6Q86W42 341 aaKnown RBP15.74■□□□□ 0.11
USP42-207ENST00000521713 TRAM1L1Q8N609 369 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 RFKQ969G6 155 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 KIAA1191Q96A73 305 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 SIGLEC10Q96LC7 697 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 IRF2BPLQ9H1B7 796 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 UPB1Q9UBR1 384 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 PPM1HQ9ULR3 514 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 KCTD3Q9Y597 815 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 PABPC4LP0CB38 370 aaKnown RBP15.73■□□□□ 0.11
USP42-207ENST00000521713 OXTRP30559 389 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 CCKBRP32239 447 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 PITX1P78337 314 aaPredicted RBP15.73■□□□□ 0.11
USP42-207ENST00000521713 BNIP3Q12983 259 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 PAOXQ6QHF9 649 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 ZNF852Q6ZMS4 543 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 OR8H3Q8N146 312 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 OR9A1PQ8NGU1 263 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 HSPBAP1Q96EW2 488 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 OR2M4Q96R27 311 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 ABCB9Q9NP78 766 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 ZCCHC3Q9NUD5 404 aaKnown RBP15.73■□□□□ 0.11
USP42-207ENST00000521713 TMEM98Q9Y2Y6 226 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 SETD1AO15047 1707 aaKnown RBP15.73■□□□□ 0.11
USP42-207ENST00000521713 FAM72CH0Y354 149 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 LAMTOR5O43504 91 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 PAK4O96013 591 aaPredicted RBP15.73■□□□□ 0.11
USP42-207ENST00000521713 RLN1P04808 185 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 CDH1P12830 882 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 CREB1P16220 341 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 MNDAP41218 407 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 NFATC2Q13469 925 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 PHF19Q5T6S3 580 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 FAM72AQ5TYM5 149 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 FAM72DQ6L9T8 149 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 ANKRD46Q86W74 232 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 FAM72BQ86X60 149 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 WDR92Q96MX6 357 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 HAPLN2Q9GZV7 340 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 ADAP2Q9NPF8 381 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 NHSL1Q5SYE7 1610 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 NWD2Q9ULI1 1742 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 LDOC1O95751 146 aaPredicted RBP15.73■□□□□ 0.11
USP42-207ENST00000521713 AGR2O95994 175 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 FOSL2P15408 326 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 PRKCHP24723 683 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 RPL10P27635 214 aaKnown RBP15.73■□□□□ 0.11
USP42-207ENST00000521713 NRG3P56975 720 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 EIF5AP63241 154 aaKnown RBP15.73■□□□□ 0.11
USP42-207ENST00000521713 EIPR1Q53HC9 387 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 DCST1Q5T197 706 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 OGFOD2Q6N063 350 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 RASGRP3Q8IV61 690 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 GDE1Q9NZC3 331 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 GJD2Q9UKL4 321 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 SHMT2P34897 504 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 PIK3CBP42338 1070 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 STK19P49842 368 aaPredicted RBP15.73■□□□□ 0.11
USP42-207ENST00000521713 PGDP52209 483 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 OAFQ86UD1 273 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 CENPSQ8N2Z9 138 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 SETD7Q8WTS6 366 aaKnown RBP15.73■□□□□ 0.11
USP42-207ENST00000521713 GLYATL1Q969I3 302 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 CDH7Q9ULB5 785 aa15.73■□□□□ 0.11
USP42-207ENST00000521713 A0A1W2PP55 124 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 CXorf49A8MYA2 514 aaPredicted RBP15.72■□□□□ 0.11
USP42-207ENST00000521713 FOXO6A8MYZ6 492 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 TGFB1P01137 390 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 CRISP3P54108 245 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 C2CD4AQ8NCU7 369 aaPredicted RBP15.72■□□□□ 0.11
USP42-207ENST00000521713 OR4E2Q8NGC2 313 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 FIBINQ8TAL6 211 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 GPR151Q8TDV0 419 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 CYP8B1Q9UNU6 501 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 PIAS3Q9Y6X2 628 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 MYO9BQ13459 2157 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 EI24O14681 340 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 GSTT2BP0CG30 244 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 CD36P16671 472 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 IL7RP16871 459 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 VBP1P61758 197 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 ZNF423Q2M1K9 1284 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 UAP1L1Q3KQV9 507 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 GLIS1Q8NBF1 620 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 BIRC8Q96P09 236 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 SPATA6Q9NWH7 488 aaPredicted RBP15.72■□□□□ 0.11
USP42-207ENST00000521713 NKIRAS2Q9NYR9 191 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms