RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SLC12A4Q9UP95 1085 aa7□□□□□ -1.29
CTNNA1-227ENST00000521387 PLLPQ9Y342 182 aa7□□□□□ -1.29
CTNNA1-227ENST00000521387 PRKAB1Q9Y478 270 aa7□□□□□ -1.29
CTNNA1-227ENST00000521387 HRH3Q9Y5N1 445 aa7□□□□□ -1.29
CTNNA1-227ENST00000521387 EPPK1P58107 5090 aaKnown RBP7□□□□□ -1.29
CTNNA1-227ENST00000521387 USF3Q68DE3 2245 aa7□□□□□ -1.29
CTNNA1-227ENST00000521387 CXorf51AA0A1B0GTR3 108 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 ARHGAP42A6NI28 874 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 WASH4PA8MWX3 477 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 A8MX80 341 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 H0YHG0 523 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 DFFAO00273 331 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 MSTNO14793 375 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 PSMD3O43242 534 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 ZNF189O75820 626 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 IGHEP01854 428 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 F7P08709 466 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 ERVK-10P10266 1014 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 MX2P20592 715 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 CCNCP24863 283 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 HNRNPH1P31943 449 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 SERPINB6P35237 376 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 RBMXP38159 391 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 CAPZBP47756 277 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 SERPINB4P48594 390 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 EPHB1P54762 984 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 KEAP1Q14145 624 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 LBRQ14739 615 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 CRYMQ14894 314 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 POLD3Q15054 466 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 ITPRIPL1Q6GPH6 555 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 IRGCQ6NXR0 463 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 ERAP2Q6P179 960 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 CYB5D1Q6P9G0 228 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 ISLR2Q6UXK2 745 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 FGD2Q7Z6J4 655 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 C11orf96Q7Z7L8 435 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 TRIM74Q86UV6 250 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 KLHDC8BQ8IXV7 354 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 THAP3Q8WTV1 239 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 ZNF669Q96BR6 464 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 MTBPQ96DY7 904 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 SRPK1Q96SB4 655 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 VAT1Q99536 393 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 MAP3K3Q99759 626 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 NAT9Q9BTE0 207 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 RAB33BQ9H082 229 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 RNF32Q9H0A6 362 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 MYLK2Q9H1R3 596 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 EPS8L2Q9H6S3 715 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 PLEKHF2Q9H8W4 249 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 MKS1Q9NXB0 559 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 STMN3Q9NZ72 180 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 UBP1Q9NZI7 540 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 IL1RAPL1Q9NZN1 696 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 KLHL14Q9P2G3 628 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 FBXL4Q9UKA2 621 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 PPT2Q9UMR5 302 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 EDARQ9UNE0 448 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 RNF6Q9Y252 685 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 KCNK6Q9Y257 313 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 CHKBQ9Y259 395 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 PTRH2Q9Y3E5 179 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 PSAT1Q9Y617 370 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 USH1CQ9Y6N9 552 aa6.99□□□□□ -1.29
CTNNA1-227ENST00000521387 NUP210LQ5VU65 1888 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 TRAV17A0A0B4J275 112 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 KIR2DS5A0A0G2JLQ3 304 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 A0A0G2JNG1 304 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 ERI2A8K979 691 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 KIR2DS3K7RE56 304 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 MAFKO60675 156 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 DNAJC6O75061 913 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 TMCC1O94876 653 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 RASAL1O95294 804 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 CRYABP02511 175 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 ELFN1P0C7U0 828 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 F3P13726 295 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 EGR1P18146 543 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 CNTFP26441 200 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 NMBRP28336 390 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 HTR7P34969 479 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 CRHR1P34998 444 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 PAPOLAP51003 745 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 DCAF7P61962 342 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 NAB1Q13506 487 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 LRP8Q14114 963 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 PRPSAP1Q14558 356 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 KIR2DS5Q14953 304 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 ACOX1Q15067 660 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 ANKRD20A4Q4UJ75 823 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 TEDDM1Q5T9Z0 273 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 RFLNAQ6ZTI6 216 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 DPPA4Q7L190 304 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 NLRP8Q86W28 1048 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 HIPK1Q86Z02 1210 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 CAMK1DQ8IU85 385 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 NDUFAF2Q8N183 169 aa6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 GOT1L1Q8NHS2 421 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-227ENST00000521387 SPATA22Q8NHS9 363 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms