RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 HNRNPABQ99729 332 aaKnown RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 KXD1Q9BQD3 176 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 DCTN5Q9BTE1 182 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 DUSP16Q9BY84 665 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 TRIM7Q9C029 511 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 CTDSP1Q9GZU7 261 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 MIS12Q9H081 205 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 MTIF3Q9H2K0 278 aaKnown RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 GOLPH3Q9H4A6 298 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 MRPL47Q9HD33 250 aaKnown RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 MARCH5Q9NX47 278 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 SPG21Q9NZD8 308 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 UVRAGQ9P2Y5 699 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 ANAPC7Q9UJX3 599 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 RALYQ9UKM9 306 aaKnown RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 KCNK7Q9Y2U2 307 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 JRKLQ9Y4A0 524 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 HYOU1Q9Y4L1 999 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 ALG6Q9Y672 507 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 PRSS21Q9Y6M0 314 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 SCINQ9Y6U3 715 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 RALGAPA2Q2PPJ7 1873 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 SIGLEC16A6NMB1 481 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 EBAG9O00559 213 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 DVL1O14640 695 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 XPO1O14980 1071 aaKnown RBP3.88□□□□□ -1.79
CLK4-207ENST00000520909 PLRG1O43660 514 aaKnown RBP3.88□□□□□ -1.79
CLK4-207ENST00000520909 SPOPO43791 374 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 GRAP2O75791 330 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 BEST1O76090 585 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 PROSCO94903 275 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 GJB5O95377 273 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 CSF1P09603 554 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 OR4Q2P0C623 313 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 KRT3P12035 628 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 HLA-DOBP13765 273 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 BDNFP23560 247 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 CYP2F1P24903 491 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 SERPINB3P29508 390 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 CA8P35219 290 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 SERPINF1P36955 418 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 GABRB2P47870 512 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 DVL1P1P54792 670 aaPredicted RBP3.88□□□□□ -1.79
CLK4-207ENST00000520909 HADHBP55084 474 aaKnown RBP3.88□□□□□ -1.79
CLK4-207ENST00000520909 RPL7AP62424 266 aaKnown RBP3.88□□□□□ -1.79
CLK4-207ENST00000520909 TUBB2AQ13885 445 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 TAF5Q15542 800 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 MAP9Q49MG5 647 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 ZNF280DQ6N043 979 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 C11orf63Q6NUN7 778 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 PRSS55Q6UWB4 352 aaPredicted RBP3.88□□□□□ -1.79
CLK4-207ENST00000520909 C4orf50Q6ZRC1 276 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 FAM183BPQ6ZVS7 135 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 SLFN11Q7Z7L1 901 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 TMEM110Q86TL2 294 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 NT5DC3Q86UY8 548 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 PIGZQ86VD9 579 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 ODF3L1Q8IXM7 274 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 SIX6OS1Q8N1H7 587 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 SLC39A11Q8N1S5 342 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 ATAD1Q8NBU5 361 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 OR10V1Q8NGI7 309 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 PHOSPHO2Q8TCD6 241 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 MAGEC3Q8TD91 643 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 NDRG1Q92597 394 aaKnown RBP3.88□□□□□ -1.79
CLK4-207ENST00000520909 HSPH1Q92598 858 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 SMARCD1Q96GM5 515 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 PCED1BQ96HM7 432 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 CAPZA3Q96KX2 299 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 HSFY1Q96LI6 401 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 MCEEQ96PE7 176 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 KCNK16Q96T55 309 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 PKMYT1Q99640 499 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 TUBB2BQ9BVA1 445 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 WDR12Q9GZL7 423 aaKnown RBP3.88□□□□□ -1.79
CLK4-207ENST00000520909 DMAP1Q9NPF5 467 aaPredicted RBP3.88□□□□□ -1.79
CLK4-207ENST00000520909 C1RLQ9NZP8 487 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 WDR35Q9P2L0 1181 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 SNX12Q9UMY4 172 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 PACSIN2Q9UNF0 486 aaPredicted RBP3.88□□□□□ -1.79
CLK4-207ENST00000520909 PCDHGB5Q9Y5G0 923 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 SAR1BQ9Y6B6 198 aa3.88□□□□□ -1.79
CLK4-207ENST00000520909 PDCD11Q14690 1871 aaKnown RBP3.87□□□□□ -1.79
CLK4-207ENST00000520909 MIF4GDA9UHW6 222 aaKnown RBP3.87□□□□□ -1.79
CLK4-207ENST00000520909 F8VP50 259 aa3.87□□□□□ -1.79
CLK4-207ENST00000520909 ADAM12O43184 909 aa3.87□□□□□ -1.79
CLK4-207ENST00000520909 PAPSS1O43252 624 aaPredicted RBP3.87□□□□□ -1.79
CLK4-207ENST00000520909 PCDH7O60245 1069 aa3.87□□□□□ -1.79
CLK4-207ENST00000520909 CEP104O60308 925 aa3.87□□□□□ -1.79
CLK4-207ENST00000520909 SKAP2O75563 359 aaPredicted RBP3.87□□□□□ -1.79
CLK4-207ENST00000520909 CSPG5O95196 566 aa3.87□□□□□ -1.79
CLK4-207ENST00000520909 CXCL14O95715 111 aa3.87□□□□□ -1.79
CLK4-207ENST00000520909 URODP06132 367 aa3.87□□□□□ -1.79
CLK4-207ENST00000520909 PDGFRAP16234 1089 aa3.87□□□□□ -1.79
CLK4-207ENST00000520909 ZNF8P17098 575 aaPredicted RBP3.87□□□□□ -1.79
CLK4-207ENST00000520909 DESP17661 470 aa3.87□□□□□ -1.79
CLK4-207ENST00000520909 TCP1P17987 556 aaKnown RBP3.87□□□□□ -1.79
CLK4-207ENST00000520909 SRD5A1P18405 259 aa3.87□□□□□ -1.79
CLK4-207ENST00000520909 PSMA2P25787 234 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms