RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 GLT6D1Q7Z4J2 308 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 CDC20BQ86Y33 519 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 MCATQ8IVS2 390 aaKnown RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 VSTM4Q8IW00 320 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 TRIM42Q8IWZ5 723 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 LGI4Q8N135 537 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 LRRC75A-AS1Q8N1F1 130 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 MDS2Q8NDY4 140 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 OR5K2Q8NHB8 316 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 FAM71BQ8TC56 605 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 TMEM158Q8WZ71 300 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 TFGQ92734 400 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 ULK4Q96C45 1275 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 C8orf44Q96CB5 159 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 ZNF653Q96CK0 615 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 IMP4Q96G21 291 aaKnown RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 DCUN1D1Q96GG9 259 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 MPP4Q96JB8 637 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 ZNF285Q96NJ3 590 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 OLFM1Q99784 485 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 ARPC5LQ9BPX5 153 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 C19orf43Q9BQ61 176 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 SELENOSQ9BQE4 189 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 GPATCH1Q9BRR8 931 aaKnown RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 ZNF670Q9BS34 389 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 BDH2Q9BUT1 245 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 TGIF2Q9GZN2 237 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 THAP2Q9H0W7 228 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 SLC25A51Q9H1U9 297 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 HSD3B7Q9H2F3 369 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 COG4Q9H9E3 785 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 PCDH18Q9HCL0 1135 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 BPIFA1Q9NP55 256 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 MKKSQ9NPJ1 570 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 LRFN1Q9P244 771 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 B4GALT7Q9UBV7 327 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 C19orf25Q9UFG5 118 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 GNPTGQ9UJJ9 305 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 PYCARDQ9ULZ3 195 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 CDC14AQ9UNH5 594 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 ICKQ9UPZ9 632 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 LUC7L2Q9Y383 392 aaKnown RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 L3MBTL1Q9Y468 752 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 FAM169AQ9Y6X4 670 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 TLN2Q9Y4G6 2542 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 HMX2A2RU54 273 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 AGAP14A8MT82 685 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 RNF212BA8MTL3 300 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 ISM1B1AKI9 464 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 TARM1B6A8C7 271 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 QSOX1O00391 747 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 DYNC1I1O14576 645 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 LIN7AO14910 233 aaPredicted RBP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 SMNDC1O75940 238 aaKnown RBP eCLIP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 LY6G6DO95868 133 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 EPOP01588 193 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 RPN2P04844 631 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 POLBP06746 335 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 HEXBP07686 556 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 SP1P08047 785 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 TPM1P09493 284 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 GZMAP12544 262 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 ATP1B2P14415 290 aaPredicted RBP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 FERP16591 822 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 MAGP20916 626 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 FBLP22087 321 aaKnown RBP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 IL1R2P27930 398 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 OR1D4P47884 311 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 ZFP36L2P47974 494 aaKnown RBP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 EMP2P54851 167 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 SH3BGRP55822 239 aaPredicted RBP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 DCAF7P61962 342 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 NKX6-1P78426 367 aaPredicted RBP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 EEF1A2Q05639 463 aaKnown RBP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 PPIDQ08752 370 aaKnown RBP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 WASHC5Q12768 1159 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 IFT88Q13099 833 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 TBX2Q13207 712 aaPredicted RBP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 TUBA3CQ13748 450 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 NAA25Q14CX7 972 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 PDK2Q15119 407 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 TAZQ16635 292 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 HADHQ16836 314 aaKnown RBP4.62□□□□□ -1.67
SDCBP-207ENST00000520168 MUM1Q2TAK8 710 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 FLYWCH1Q4VC44 716 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 ACER2Q5QJU3 275 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 CATSPEREQ5SY80 951 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 FKBP15Q5T1M5 1219 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 CDKAL1Q5VV42 579 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 FBXW10Q5XX13 1052 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 PLAG1Q6DJT9 500 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 SLC25A25Q6KCM7 469 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 PPP4R4Q6NUP7 873 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 ARHGAP11AQ6P4F7 1023 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 TUBA3EQ6PEY2 450 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 PAOXQ6QHF9 649 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 TMEM205Q6UW68 189 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 PRSS57Q6UWY2 283 aa4.62□□□□□ -1.67
SDCBP-207ENST00000520168 C3P1Q6ZMU1 363 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms