RNA–Protein interactions for RNA: ENST00000520122.1

AP3B1-206, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 3

Gene AP3B1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-206ENST00000520122 NSMCE4AQ9NXX6 385 aa4.35□□□□□ -1.71
AP3B1-206ENST00000520122 COPG2Q9UBF2 871 aa4.35□□□□□ -1.71
AP3B1-206ENST00000520122 TCEAL9Q9UHQ7 104 aa4.35□□□□□ -1.71
AP3B1-206ENST00000520122 SARDHQ9UL12 918 aa4.35□□□□□ -1.71
AP3B1-206ENST00000520122 AGTPBP1Q9UPW5 1226 aa4.35□□□□□ -1.71
AP3B1-206ENST00000520122 IFT52Q9Y366 437 aa4.35□□□□□ -1.71
AP3B1-206ENST00000520122 MRPL11Q9Y3B7 192 aaKnown RBP4.35□□□□□ -1.71
AP3B1-206ENST00000520122 TRIM17Q9Y577 477 aa4.35□□□□□ -1.71
AP3B1-206ENST00000520122 STYXL1Q9Y6J8 313 aa4.35□□□□□ -1.71
AP3B1-206ENST00000520122 ZNFX1Q9P2E3 1918 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 MYH14Q7Z406 1995 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 TCRBV3S1A0A5B6 114 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 SAGE2PA6NJ88 616 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 C3orf70A6NLC5 250 aaPredicted RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 AQP12BA6NM10 295 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 TRPC5OSA6NMA1 111 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 BBIP1A8MTZ0 92 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 HACD1B0YJ81 288 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 H0YAE9 185 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 MS4A18H0YCH9 400 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 H3BSA7 217 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 ZNF195O14628 629 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 PFDN6O15212 129 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 HDAC3O15379 428 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 MED7O43513 233 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 EXTL3O43909 919 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 MRPS14O60783 128 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 STAM2O75886 525 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 CLPXO76031 633 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 SUPT7LO94864 414 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 CPNE6O95741 557 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 IFNB1P01574 187 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 LCKP06239 509 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 F7P08709 466 aaPredicted RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 ARP10275 920 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 MYF5P13349 255 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 CCNA2P20248 432 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 RFC1P35251 1148 aaPredicted RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 MAGEA12P43365 314 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 QARSP47897 775 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 SERPINB10P48595 397 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 NR2C2P49116 596 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 ATP4BP51164 291 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 KPNA2P52292 529 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 EPHB1P54762 984 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 SLC37A1P57057 533 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 SNX16P57768 344 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 TAS2R40P59535 323 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 SELENOVP59797 346 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 YWHAGP61981 247 aaKnown RBP eCLIP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 FKBP1AP62942 108 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 OTUD4Q01804 1114 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 PPARDQ03181 441 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 CDC20Q12834 499 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 BNIP2Q12982 314 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 PRKAA1Q13131 559 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 GRAPQ13588 217 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 CUL2Q13617 745 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 PTK2BQ14289 1009 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 OXA1LQ15070 435 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 TRIM16LQ309B1 348 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 ARL13BQ3SXY8 428 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 FASTKD1Q53R41 847 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 COQ5Q5HYK3 327 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 SAMD4BQ5PRF9 694 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 AGAP7PQ5VUJ5 663 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 C8orf82Q6P1X6 216 aaPredicted RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 C16orf87Q6PH81 154 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 DCUN1D2Q6PH85 259 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 DARS2Q6PI48 645 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 USP17L6PQ6QN14 398 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 ABRAXAS1Q6UWZ7 409 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 LRRC49Q8IUZ0 686 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 LACC1Q8IV20 430 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 CDKL3Q8IVW4 592 aaPredicted RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 AQP12AQ8IXF9 295 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 FAM217AQ8IXS0 508 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 DAW1Q8N136 415 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 CENPSQ8N2Z9 138 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 CLIP4Q8N3C7 705 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 MCPH1Q8NEM0 835 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 GRAPLQ8TC17 118 aaPredicted RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 ACTL9Q8TC94 416 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 TFB1MQ8WVM0 346 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 SEPT8Q92599 483 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 C12orf43Q96C57 262 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 ROPN1LQ96C74 230 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 VMP1Q96GC9 406 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 DNAJC1Q96KC8 554 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 EBNA1BP2Q99848 306 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 LXNQ9BS40 222 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 HERPUD2Q9BSE4 406 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 HEMGNQ9BXL5 484 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 POLDIP3Q9BY77 421 aaKnown RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 DNAI2Q9GZS0 605 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 ILKAPQ9H0C8 392 aaPredicted RBP4.34□□□□□ -1.71
AP3B1-206ENST00000520122 RMND5AQ9H871 391 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 SP140LQ9H930 580 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 AS3MTQ9HBK9 375 aa4.34□□□□□ -1.71
AP3B1-206ENST00000520122 POPDC2Q9HBU9 364 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms