RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 SPTBN1Q01082 2364 aaKnown RBP11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 FITM1A5D6W6 292 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 FAM159BA6NKW6 160 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 DSCR3O14972 297 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 SRPX2O60687 465 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 IPO13O94829 963 aaKnown RBP11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 ESR1P03372 595 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 ALPPP05187 535 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 UMODP07911 640 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 GP1BBP13224 206 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 PGAM1P18669 254 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 ARNTP27540 789 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 GRIA3P42263 894 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 SLC18A2Q05940 514 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 GRM7Q14831 915 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 SLC9A5Q14940 896 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 NAA25Q14CX7 972 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 FAM214AQ32MH5 1076 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 KBTBD12Q3ZCT8 623 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 SPANXN3Q5MJ09 141 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 CTSL3PQ5NE16 218 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 SLC6A19Q695T7 634 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 KIAA0930Q6ICG6 404 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 IGFL3Q6UXB1 125 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 OVCH1Q7RTY7 1134 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 PPP1R32Q7Z5V6 425 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 TAX1BP1Q86VP1 789 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 OTUD6BQ8N6M0 293 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 ANKS4BQ8N8V4 417 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 TTC29Q8NA56 475 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 Q8NA96 180 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 LPGAT1Q92604 370 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 VPS11Q9H270 941 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 SLC26A1Q9H2B4 701 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 ATP13A2Q9NQ11 1180 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 SLC22A11Q9NSA0 550 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 CUTCQ9NTM9 273 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 SYBUQ9NX95 663 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 SPATA7Q9P0W8 599 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 SAMD15Q9P1V8 674 aa11.92□□□□□ -0.5
TRAPPC9-206ENST00000519482 MDC1Q14676 2089 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 TYROBPO43914 113 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 BANF1O75531 89 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 MATN4O95460 622 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 VIMP08670 466 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 KRT4P19013 534 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 PAMP19021 973 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 ITGAXP20702 1163 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 OGNP20774 298 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 GNLYP22749 145 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 MMP11P24347 488 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 FMO4P31512 558 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 BDKRB1P46663 353 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 UQCRFS1P47985 274 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 MPP2Q14168 576 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 GBX1Q14549 363 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 CYP2A13Q16696 494 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 CCSMST1Q4G0I0 132 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 FHL5Q5TD97 284 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 HHATQ5VTY9 493 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 CNSTQ6PJW8 725 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 CES3Q6UWW8 571 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 CAPN12Q6ZSI9 719 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 OR2A1Q8NGT9 310 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 ACMSDQ8TDX5 336 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 TM9SF4Q92544 642 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 CFAP36Q96G28 342 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 SEC16BQ96JE7 1060 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 PSMG3-AS1Q96PY0 264 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 MFRPQ9BY79 579 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 SLC29A3Q9BZD2 475 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 ZNF552Q9H707 407 aaPredicted RBP11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 NXT1Q9UKK6 140 aaKnown RBP11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 VPS9D1Q9Y2B5 631 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 FAM169AQ9Y6X4 670 aa11.91□□□□□ -0.5
TRAPPC9-206ENST00000519482 FAM237BA0A1B0GVD1 139 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 A0A1W2PPV9 198 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 CTSVO60911 334 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 NIPSNAP2O75323 286 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 C1QAP02745 245 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 CREB1P16220 341 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 CHRM3P20309 590 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 MGAT5Q09328 741 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 AIMP2Q13155 320 aaKnown RBP11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 RAPSNQ13702 412 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 NKG7Q16617 165 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 CASC4Q6P4E1 433 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 TRIM42Q8IWZ5 723 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 CTAGE3PQ8IX95 158 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 AGGF1Q8N302 714 aaeCLIP11.9□□□□□ -0.52e-7■■■■■ 56.9
TRAPPC9-206ENST00000519482 PPM1NQ8N819 430 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 ANKRD42Q8N9B4 389 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 BANPQ8N9N5 519 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 OR2L3Q8NG85 312 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 MZB1Q8WU39 189 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 VPS50Q96JG6 964 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 CABS1Q96KC9 395 aa11.9□□□□□ -0.5
TRAPPC9-206ENST00000519482 SPSB2Q99619 263 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms