RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 CCDC12Q8WUD4 166 aaPredicted RBP5.68□□□□□ -1.5
SQLE-203ENST00000518931 MITD1Q8WV92 249 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 OR1E3Q8WZA6 343 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 PANX2Q96RD6 677 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 ASCL2Q99929 193 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 C11orf70Q9BRQ4 267 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 ZNF577Q9BSK1 485 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 SLC26A1Q9H2B4 701 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 ADNPQ9H2P0 1102 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 UBQLN3Q9H347 655 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 MVB12BQ9H7P6 319 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 EVA1AQ9H8M9 152 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 MAP6D1Q9H9H5 199 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 LY9Q9HBG7 655 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 TREM1Q9NP99 234 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 COPG2Q9UBF2 871 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 PEMTQ9UBM1 199 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 ICKQ9UPZ9 632 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 DHDHQ9UQ10 334 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 PARD3Q8TEW0 1356 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 MST1RQ04912 1400 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 IQANK1A0A1B0GTG1 560 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 HELTA6NFD8 242 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 MYMKA6NI61 221 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 OR6C75A6NL08 312 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 C17orf100A8MU93 164 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 BECN2A8MW95 431 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 B4DGG1 531 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 CHMP2AO43633 222 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 STRNO43815 780 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 DNAJB6O75190 326 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 TMCC1O94876 653 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 CBX6O95503 412 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 CLPTM1O96005 669 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 CRYABP02511 175 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 CRYGCP07315 174 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 ZCCHC18P0CG32 403 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 ANPEPP15144 967 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 CYP2B6P20813 491 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 ITGA3P26006 1051 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 NMT1P30419 496 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 TNFSF8P32971 234 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 ALDH3B1P43353 468 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 F2RL1P55085 397 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 B2MP61769 119 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 RPL23AP62750 156 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 PDE1BQ01064 536 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 OTUD4Q01804 1114 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 CXCL9Q07325 125 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 DMPKQ09013 629 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 PPP1R8Q12972 351 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 XRCC4Q13426 336 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 DRP2Q13474 957 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 RUNX2Q13950 521 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 PTPRCAPQ14761 206 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 UGCGQ16739 394 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 MTHFSDQ2M296 383 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 KRT24Q2M2I5 525 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 MPPE1Q53F39 396 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 WASHC2DQ5SRD0 308 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 KDM7AQ6ZMT4 941 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 CFAP77Q6ZQR2 320 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 AACSQ86V21 672 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 LRRC57Q8N9N7 239 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 L3MBTL4Q8NA19 623 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 ZNF397Q8NF99 534 aaPredicted RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 TMEM185AQ8NFB2 350 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 BPIFCQ8NFQ6 507 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 RNASE8Q8TDE3 154 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 FAR1Q8WVX9 515 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 MAIP1Q8WWC4 291 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 TCP11Q8WWU5 503 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 ROBO4Q8WZ75 1007 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 BSCL2Q96G97 398 aaPredicted RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 CYTH2Q99418 400 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 TSG101Q99816 390 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 CLSTN3Q9BQT9 956 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 HAUS8Q9BT25 410 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 NPLQ9BXD5 320 aaPredicted RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 FAM234AQ9H0X4 552 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 GOLPH3LQ9H4A5 285 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 NOL11Q9H8H0 719 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 MINDY3Q9H8M7 445 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 SRD5A3Q9H8P0 318 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 PANK3Q9H999 370 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 UCK1Q9HA47 277 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 RNF146Q9NTX7 359 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 C20orf141Q9NUB4 165 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 DDX28Q9NUL7 540 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 SETD4Q9NVD3 440 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 PEF1Q9UBV8 284 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 HSPB7Q9UBY9 170 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 PLEKHB1Q9UF11 243 aaPredicted RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 PLA2G4CQ9UP65 541 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 KCNK6Q9Y257 313 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 WBP11Q9Y2W2 641 aaKnown RBP5.67□□□□□ -1.5
SQLE-203ENST00000518931 RAP2CQ9Y3L5 183 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 CMAHPQ9Y471 501 aa5.67□□□□□ -1.5
SQLE-203ENST00000518931 CARMIL1Q5VZK9 1371 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms