RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 ZNF395Q9H8N7 513 aaPredicted RBP11.32□□□□□ -0.6
AP3B1-203ENST00000517940 CNOT10Q9H9A5 744 aaKnown RBP11.32□□□□□ -0.6
AP3B1-203ENST00000517940 PELI2Q9HAT8 420 aa11.32□□□□□ -0.6
AP3B1-203ENST00000517940 TMEM184CQ9NVA4 438 aa11.32□□□□□ -0.6
AP3B1-203ENST00000517940 GPRC5BQ9NZH0 403 aa11.32□□□□□ -0.6
AP3B1-203ENST00000517940 FOXJ2Q9P0K8 574 aa11.32□□□□□ -0.6
AP3B1-203ENST00000517940 ANKMY1Q9P2S6 941 aa11.32□□□□□ -0.6
AP3B1-203ENST00000517940 ZNF490Q9ULM2 529 aaPredicted RBP11.32□□□□□ -0.6
AP3B1-203ENST00000517940 TMCO1Q9UM00 188 aa11.32□□□□□ -0.6
AP3B1-203ENST00000517940 PCDHGA4Q9Y5G9 962 aa11.32□□□□□ -0.6
AP3B1-203ENST00000517940 APC2O95996 2303 aa11.32□□□□□ -0.6
AP3B1-203ENST00000517940 A0A0J9YVX5 310 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 HMGB1P1B2RPK0 211 aaPredicted RBP11.31□□□□□ -0.6
AP3B1-203ENST00000517940 B4E171 279 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 PLD2O14939 933 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 CCNDBP1O95273 360 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 CAPNS1P04632 268 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 C1GALT1C1LP0DN25 315 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 ZNF28P17035 718 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 ITGAXP20702 1163 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 TSPAN7P41732 249 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 SCTRP47872 440 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 FOXA1P55317 472 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 RELAQ04206 551 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 CLCQ05315 142 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 HYAL2Q12891 473 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 CHIT1Q13231 466 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 TUBB3Q13509 450 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 SLBPQ14493 270 aaKnown RBP eCLIP11.31□□□□□ -0.6
AP3B1-203ENST00000517940 RTP5Q14D33 572 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 TBCCQ15814 346 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 PRTGQ2VWP7 1150 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 LIPMQ5VYY2 423 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 SYVN1Q86TM6 617 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 MCATQ8IVS2 390 aaKnown RBP11.31□□□□□ -0.6
AP3B1-203ENST00000517940 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.31□□□□□ -0.6
AP3B1-203ENST00000517940 ANKRD42Q8N9B4 389 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 L3MBTL4Q8NA19 623 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 SLC38A9Q8NBW4 561 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 CREB3L4Q8TEY5 395 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 TM4SF19Q96DZ7 209 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 C10orf90Q96M02 699 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 OR6C1Q96RD1 312 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 SPRTNQ9H040 489 aaPredicted RBP11.31□□□□□ -0.6
AP3B1-203ENST00000517940 EHD1Q9H4M9 534 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 IPPKQ9H8X2 491 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 PDE7BQ9NP56 450 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 SEMA4BQ9NPR2 832 aaPredicted RBP11.31□□□□□ -0.6
AP3B1-203ENST00000517940 FGF21Q9NSA1 209 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 STARD5Q9NSY2 213 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 SOHLH2Q9NX45 425 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 PISDQ9UG56 409 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 MRPS2Q9Y399 296 aaKnown RBP11.31□□□□□ -0.6
AP3B1-203ENST00000517940 RNF11Q9Y3C5 154 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 PCDHGA8Q9Y5G5 932 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 TNPO3Q9Y5L0 923 aaKnown RBP11.31□□□□□ -0.6
AP3B1-203ENST00000517940 B3GALT1Q9Y5Z6 326 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 KCNE2Q9Y6J6 123 aa11.31□□□□□ -0.6
AP3B1-203ENST00000517940 SCN3AQ9NY46 2000 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 TRBC2A0A5B9 178 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 FITM1A5D6W6 292 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 PABPN1LA6NDY0 278 aaKnown RBP11.3□□□□□ -0.6
AP3B1-203ENST00000517940 GOLGA6L10A6NI86 522 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 CDRT15L2A8MXV6 281 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 TMEM150CB9EJG8 249 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 H0YGG7 62 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 ITM2AO43736 263 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 SUPT7LO94864 414 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 ZWINTO95229 277 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 CHRNGP07510 517 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 FGF5P12034 268 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 EZRP15311 586 aaKnown RBP11.3□□□□□ -0.6
AP3B1-203ENST00000517940 EPB42P16452 691 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 GNAZP19086 355 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 TAC1P20366 129 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 CSTF2P33240 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
AP3B1-203ENST00000517940 CCR8P51685 355 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 ARF3P61204 181 aaPredicted RBP11.3□□□□□ -0.6
AP3B1-203ENST00000517940 GABREP78334 506 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 SHC2P98077 582 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 HKDC1Q2TB90 917 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 TCHHL1Q5QJ38 904 aaPredicted RBP11.3□□□□□ -0.6
AP3B1-203ENST00000517940 GRHL2Q6ISB3 625 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 PWWP2BQ6NUJ5 590 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 IGF2-ASQ6U949 168 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 SLC22A9Q8IVM8 553 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 CCDC63Q8NA47 563 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 OR4F6Q8NGB9 312 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 WDR36Q8NI36 951 aaKnown RBP11.3□□□□□ -0.6
AP3B1-203ENST00000517940 WDR20Q8TBZ3 569 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 MGARPQ8TDB4 240 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 TRPC4APQ8TEL6 797 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 AGAP11Q8TF27 550 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 GRAMD1AQ96CP6 724 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 KCNA7Q96RP8 456 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 ZNF382Q96SR6 550 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 CMKLR1Q99788 373 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 ZFYVE21Q9BQ24 234 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 NTMT1Q9BV86 223 aa11.3□□□□□ -0.6
AP3B1-203ENST00000517940 STRADBQ9C0K7 418 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms