RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 AGAP11Q8TF27 550 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 TM4SF19Q96DZ7 209 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 TCTN2Q96GX1 697 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 LIN37Q96GY3 246 aaPredicted RBP9.47□□□□□ -0.89
CLN8-202ENST00000517514 TMEM74Q96NL1 305 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 ZNF382Q96SR6 550 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 SORT1Q99523 831 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 EHD1Q9H4M9 534 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 APMAPQ9HDC9 416 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 ENAMQ9NRM1 1142 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 ANKMY1Q9P2S6 941 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 MID2Q9UJV3 735 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 SNX7Q9UNH6 387 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 SPTBN2O15020 2390 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 CACNA1AO00555 2505 aa9.47□□□□□ -0.89
CLN8-202ENST00000517514 A0A0J9YVX5 310 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 TRBC2A0A5B9 178 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 HGSO14964 777 aaPredicted RBP9.46□□□□□ -0.9
CLN8-202ENST00000517514 CLGNO14967 610 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 NPHS1O60500 1241 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 LYPLA1O75608 230 aaPredicted RBP9.46□□□□□ -0.9
CLN8-202ENST00000517514 OR4F21O95013 312 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 TIAF1O95411 115 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 STATHP02808 62 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 MSL3P1P0C860 447 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 ITIH1P19827 911 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 SCTRP47872 440 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 ID4P47928 161 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 ATP1A2P50993 1020 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 CCR8P51685 355 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 FOXA1P55317 472 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 MC2RQ01718 297 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 IRF8Q02556 426 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 BST1Q10588 318 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 HYAL2Q12891 473 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 LCP2Q13094 533 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 RCN2Q14257 317 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 XKR6Q5GH73 641 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 ARL13AQ5H913 290 aaPredicted RBP9.46□□□□□ -0.9
CLN8-202ENST00000517514 TCHHL1Q5QJ38 904 aaPredicted RBP9.46□□□□□ -0.9
CLN8-202ENST00000517514 PRAMEF17Q5VTA0 474 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 HHATQ5VTY9 493 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 GRHL2Q6ISB3 625 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 MCATQ8IVS2 390 aaKnown RBP9.46□□□□□ -0.9
CLN8-202ENST00000517514 LAS2Q8IYD9 372 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 OR1L3Q8NH93 324 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 CREB3L4Q8TEY5 395 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 ZNF501Q96CX3 271 aaPredicted RBP9.46□□□□□ -0.9
CLN8-202ENST00000517514 PTCD3Q96EY7 689 aaKnown RBP9.46□□□□□ -0.9
CLN8-202ENST00000517514 DEPDC7Q96QD5 511 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 KCNA7Q96RP8 456 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 MACROD1Q9BQ69 325 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 SHCBP1LQ9BZQ2 653 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 SPRTNQ9H040 489 aaPredicted RBP9.46□□□□□ -0.9
CLN8-202ENST00000517514 DRC3Q9H069 523 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 ZMYND15Q9H091 742 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 PDE7BQ9NP56 450 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 PCDHGA4Q9Y5G9 962 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 SCN3AQ9NY46 2000 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 SDK2Q58EX2 2172 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 ASPMQ8IZT6 3477 aa9.46□□□□□ -0.9
CLN8-202ENST00000517514 CCDC187A0A096LP49 1063 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 EFCAB7A8K855 629 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 C4orf51C9J302 202 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 H0YGG7 62 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 SNNO75324 88 aaPredicted RBP9.45□□□□□ -0.9
CLN8-202ENST00000517514 KATNA1O75449 491 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 SERPINE1P05121 402 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 JUPP14923 745 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 EZRP15311 586 aaKnown RBP9.45□□□□□ -0.9
CLN8-202ENST00000517514 SPINK2P20155 84 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 HRH2P25021 359 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 MLLT3P42568 568 aaPredicted RBP9.45□□□□□ -0.9
CLN8-202ENST00000517514 PIK3CGP48736 1102 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 HTR6P50406 440 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 CCNG1P51959 295 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 ARF3P61204 181 aaPredicted RBP9.45□□□□□ -0.9
CLN8-202ENST00000517514 CYP4F3Q08477 520 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 PRTGQ2VWP7 1150 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 UGT3A2Q3SY77 523 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 GGTA1PQ4G0N0 100 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 LIPJQ5W064 366 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 RAB11FIP2Q7L804 512 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLN8-202ENST00000517514 SHISA5Q8N114 240 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 DTWD1Q8N5C7 304 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 MFSD9Q8NBP5 474 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 AGBL5Q8NDL9 886 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 OR7G3Q8NG95 312 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 WDR20Q8TBZ3 569 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 ZNF75CPQ92670 426 aaPredicted RBP9.45□□□□□ -0.9
CLN8-202ENST00000517514 RNF31Q96EP0 1072 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 CNDP1Q96KN2 507 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 PAIP2Q9BPZ3 127 aaKnown RBP9.45□□□□□ -0.9
CLN8-202ENST00000517514 ZFYVE21Q9BQ24 234 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 AIF1LQ9BQI0 150 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 EFCAB11Q9BUY7 163 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 CAPS2Q9BXY5 557 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 RHBGQ9H310 441 aa9.45□□□□□ -0.9
CLN8-202ENST00000517514 NT5DC2Q9H857 520 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms