RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 RPL21P46778 160 aaKnown RBP-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 LHX2P50458 406 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 PTP4A2Q12974 167 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 CDC16Q13042 620 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 PDCLQ13371 301 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 GGTLC2Q14390 218 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 TAF5Q15542 800 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 KYAT1Q16773 422 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 PCK2Q16822 640 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 ITPRIPL2Q3MIP1 535 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 SERTAD4-AS1Q5TG53 156 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 RNF220Q5VTB9 566 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 NCR3LG1Q68D85 454 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 DGAT2L7PQ6IED9 249 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 UGT3A1Q6NUS8 523 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF880Q6PDB4 577 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 SPNS3Q6ZMD2 512 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 BEND5Q7L4P6 421 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 PIWIL3Q7Z3Z3 882 aaKnown RBP-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 R3HCC1LQ7Z5L2 792 aaKnown RBP-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 OR6J1Q8NGC5 347 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 OR13C3Q8NGS6 347 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF502Q8TBZ5 544 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 BLOC1S5Q8TDH9 187 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 RAB40AQ8WXH6 277 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 RDH5Q92781 318 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 TSNARE1Q96NA8 513 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 KIR2DL4Q99706 377 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 C1QTNF1Q9BXJ1 281 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 STRADBQ9C0K7 418 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 BRD8Q9H0E9 1235 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 SNTG1Q9NSN8 517 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 OSGIN1Q9UJX0 560 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 PILRAQ9UKJ1 303 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 BAG5Q9UL15 447 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 DDX52Q9Y2R4 599 aaKnown RBP eCLIP-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 FAM96BQ9Y3D0 163 aa-1.23□□□□□ -2.61
RNU6-542P-201ENST00000516405 FAM208BQ5VWN6 2430 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 ADGRL1O94910 1474 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 IGKV1-8A0A0C4DH67 115 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 A0A1W2PPC4 97 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 ANKRD61A6NGH8 418 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 B9A039 149 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 SURF4O15260 269 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 SPRY1O43609 319 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 PLPP2O43688 288 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 SERF1AO75920 110 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 IGHG1P01857 330 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 HEXAP06865 529 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 CISD3P0C7P0 127 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 SLC35E2P0CK97 266 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 PF4V1P10720 104 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 ADRA2CP18825 462 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 HNF1AP20823 631 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 PTGER4P35408 488 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 TGFBR1P36897 503 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 MAGEA9P43362 315 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 CCR6P51684 374 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF131P52739 623 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 RPS8P62241 208 aaKnown RBP-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 ACTA2P62736 377 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 ACTC1P68032 377 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 ACTA1P68133 377 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 FAM193AP78312 1265 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 PPIDQ08752 370 aaKnown RBP-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 VEPH1Q14D04 833 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 ABRAXAS2Q15018 415 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 IRF4Q15306 451 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 PTPN14Q15678 1187 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 MLF2Q15773 248 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 C17orf58Q2M2W7 97 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 TTC22Q5TAA0 569 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 NAA35Q5VZE5 725 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 CPLX2Q6PUV4 134 aaKnown RBP-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 UNC5DQ6UXZ4 953 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 Q6ZR03 302 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 IL17RELQ6ZVW7 336 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 SLC22A18ASQ8N1D0 253 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 OR1J2Q8NGS2 313 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 MORC4Q8TE76 937 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 MYDGFQ969H8 173 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 TIFAQ96CG3 184 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 MASTLQ96GX5 879 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 DDOQ99489 341 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 LPAR4Q99677 370 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 SMAD5Q99717 465 aaKnown RBP-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 MYD88Q99836 296 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 FOXC2Q99958 501 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 NRIP2Q9BQI9 281 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 PCGF1Q9BSM1 259 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 ST6GALNAC5Q9BVH7 336 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 VN1R1Q9GZP7 353 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF350Q9GZX5 532 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 LHX5Q9H2C1 402 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 JMJD4Q9H9V9 463 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 POLR1BQ9H9Y6 1135 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 G6PC2Q9NQR9 355 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 NECTIN3Q9NQS3 549 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 STK39Q9UEW8 545 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 OR14J1Q9UGF5 321 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms