RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 LAPTM4BQ86VI4 370 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 C17orf64Q86WR6 236 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 SPATA6LQ8N4H0 392 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 ARHGEF39Q8N4T4 335 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 AMER2Q8N7J2 671 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 OR56A3Q8NH54 315 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 MIEF2Q96C03 454 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 MMABQ96EY8 250 aaPredicted RBP12.43□□□□□ -0.42
CDK7-212ENST00000515180 VPS39Q96JC1 886 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 FER1L6-AS2Q96M78 137 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 IP6K3Q96PC2 410 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 OR4K3Q96R72 315 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 MCMBPQ9BTE3 642 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 LRRC1Q9BTT6 524 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 TRIM54Q9BYV2 358 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 RHOJQ9H4E5 214 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 WDR54Q9H977 334 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 GPR83Q9NYM4 423 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 HS3ST3B1Q9Y662 390 aa12.43□□□□□ -0.42
CDK7-212ENST00000515180 SPTA1P02549 2419 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 TCRBV9S1A1TA0A576 114 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 ESYT3A0FGR9 886 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 AGPSO00116 658 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 EIF3HO15372 352 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDK7-212ENST00000515180 PHGDHO43175 533 aaKnown RBP12.42□□□□□ -0.42
CDK7-212ENST00000515180 FAM155BO75949 473 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 C1QAP02745 245 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 ZGLP1P0C6A0 271 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 MMP11P24347 488 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 BCL6P41182 706 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 RELAQ04206 551 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 OCA2Q04671 838 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 RBBP7Q16576 425 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 C18orf21Q32NC0 220 aaPredicted RBP12.42□□□□□ -0.42
CDK7-212ENST00000515180 CATSPEREQ5SY80 951 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 FAAH2Q6GMR7 532 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 CAPN13Q6MZZ7 669 aaPredicted RBP12.42□□□□□ -0.42
CDK7-212ENST00000515180 PRMT9Q6P2P2 845 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 KIRREL2Q6UWL6 708 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 PRSS41Q7RTY9 318 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 ZNF572Q7Z3I7 529 aaPredicted RBP12.42□□□□□ -0.42
CDK7-212ENST00000515180 PARP9Q8IXQ6 854 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 GALNT16Q8N428 558 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 AMER3Q8N944 861 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 ZCCHC10Q8TBK6 192 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 ZNF592Q92610 1267 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 C8orf44Q96CB5 159 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 FBXL8Q96CD0 374 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 PDLIM5Q96HC4 596 aaKnown RBP12.42□□□□□ -0.42
CDK7-212ENST00000515180 CRB3Q9BUF7 120 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 PCBD2Q9H0N5 130 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 RAB17Q9H0T7 212 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 SPNS1Q9H2V7 528 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 TRPC4Q9UBN4 977 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 ZNF282Q9UDV7 671 aaPredicted RBP12.42□□□□□ -0.42
CDK7-212ENST00000515180 FBXL4Q9UKA2 621 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 PLAAQ9Y263 795 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 ZNF451Q9Y4E5 1061 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 NUP210LQ5VU65 1888 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 SCN3AQ9NY46 2000 aa12.42□□□□□ -0.42
CDK7-212ENST00000515180 PABPN1LA6NDY0 278 aaKnown RBP12.41□□□□□ -0.42
CDK7-212ENST00000515180 FAM159BA6NKW6 160 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 HRH2P25021 359 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 MAGEA4P43358 317 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 CD97P48960 835 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 CSRP3P50461 194 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 EMP3P54852 163 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 AP1S2P56377 157 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 RPS15AP62244 130 aaKnown RBP12.41□□□□□ -0.42
CDK7-212ENST00000515180 TSNQ15631 228 aaKnown RBP12.41□□□□□ -0.42
CDK7-212ENST00000515180 PPP1R3AQ16821 1122 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 CTAGE3PQ8IX95 158 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 NKAPQ8N5F7 415 aaKnown RBP12.41□□□□□ -0.42
CDK7-212ENST00000515180 RBMXL3Q8N7X1 1067 aaKnown RBP12.41□□□□□ -0.42
CDK7-212ENST00000515180 CLEC1AQ8NC01 280 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 KCT2Q8NC54 265 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 ZNF740Q8NDX6 193 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 OR9A4Q8NGU2 314 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 MOCOSQ96EN8 888 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 TSNARE1Q96NA8 513 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 SMAD5Q99717 465 aaKnown RBP12.41□□□□□ -0.42
CDK7-212ENST00000515180 DRC3Q9H069 523 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 CLMPQ9H6B4 373 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 ZNF552Q9H707 407 aaPredicted RBP12.41□□□□□ -0.42
CDK7-212ENST00000515180 ZBTB20Q9HC78 741 aaPredicted RBP12.41□□□□□ -0.42
CDK7-212ENST00000515180 GPAMQ9HCL2 828 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 ATP13A2Q9NQ11 1180 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 SEMA3GQ9NS98 782 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 NSMCE4AQ9NXX6 385 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 C3orf18Q9UK00 162 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 NXT1Q9UKK6 140 aaKnown RBP12.41□□□□□ -0.42
CDK7-212ENST00000515180 CDC14AQ9UNH5 594 aa12.41□□□□□ -0.42
CDK7-212ENST00000515180 HELZ2Q9BYK8 2649 aaKnown RBP12.41□□□□□ -0.42
CDK7-212ENST00000515180 IGLV3-12A0A075B6K2 115 aa12.4□□□□□ -0.42
CDK7-212ENST00000515180 KCNE1BA0A087WTH5 132 aa12.4□□□□□ -0.42
CDK7-212ENST00000515180 TXNDC9O14530 226 aa12.4□□□□□ -0.42
CDK7-212ENST00000515180 JRKO75564 520 aa12.4□□□□□ -0.42
CDK7-212ENST00000515180 WISP3O95389 354 aaPredicted RBP12.4□□□□□ -0.42
CDK7-212ENST00000515180 ANXA5P08758 320 aa12.4□□□□□ -0.42
CDK7-212ENST00000515180 ENO2P09104 434 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms