RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 TRIM54Q9BYV2 358 aa18■□□□□ 0.47
LPCAT1-206ENST00000514484 PCBD2Q9H0N5 130 aa18■□□□□ 0.47
LPCAT1-206ENST00000514484 SLC26A1Q9H2B4 701 aa18■□□□□ 0.47
LPCAT1-206ENST00000514484 TMEM184CQ9NVA4 438 aa18■□□□□ 0.47
LPCAT1-206ENST00000514484 PCDHGA9Q9Y5G4 932 aaKnown RBP18■□□□□ 0.47
LPCAT1-206ENST00000514484 CNTRLQ7Z7A1 2325 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 A0A0A6YYC8 382 aaPredicted RBP17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 FAM159BA6NKW6 160 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 I3L1I5 382 aaPredicted RBP17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 PHGDHO43175 533 aaKnown RBP17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 C1QAP02745 245 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 CCND1P24385 295 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 CASRP41180 1078 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 BCL6P41182 706 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 AP1S2P56377 157 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 MEF2AQ02078 507 aaPredicted RBP17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 CAV1Q03135 178 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 EFTUD2Q15029 972 aaKnown RBP eCLIP17.99■□□□□ 0.477e-8■■□□□ 11.8
LPCAT1-206ENST00000514484 VWA2Q5GFL6 755 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 CAPN13Q6MZZ7 669 aaPredicted RBP17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 PRMT9Q6P2P2 845 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 CTAGE3PQ8IX95 158 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 SPATA6LQ8N4H0 392 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 NKAPQ8N5F7 415 aaKnown RBP17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 TEX19Q8NA77 164 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 OR56A3Q8NH54 315 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 STT3BQ8TCJ2 826 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 CDKL2Q92772 493 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 MMABQ96EY8 250 aaPredicted RBP17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 PDLIM5Q96HC4 596 aaKnown RBP17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 IP6K3Q96PC2 410 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 CRB3Q9BUF7 120 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 YIPF2Q9BWQ6 316 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 DRC3Q9H069 523 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 GPAMQ9HCL2 828 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 GPR83Q9NYM4 423 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 TXNDC16Q9P2K2 825 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 FBXL4Q9UKA2 621 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 HS3ST3B1Q9Y662 390 aa17.99■□□□□ 0.47
LPCAT1-206ENST00000514484 VSTM2BA6NLU5 285 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 AGPSO00116 658 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 SOCS6O14544 535 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 FOXS1O43638 330 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 FAM155BO75949 473 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 ENO2P09104 434 aaPredicted RBP17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 ZGLP1P0C6A0 271 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 NPPBP16860 134 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 MMP11P24347 488 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 GMPRP36959 345 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 MAGEA4P43358 317 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 SLC12A2P55011 1212 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 RPS15AP62244 130 aaKnown RBP17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 RELAQ04206 551 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 OCA2Q04671 838 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 KLC1Q07866 573 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 TSNQ15631 228 aaKnown RBP17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 RBBP7Q16576 425 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 SYT16Q17RD7 645 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 KBTBD12Q3ZCT8 623 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 NADK2Q4G0N4 442 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 PRSS41Q7RTY9 318 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 AMER3Q8N944 861 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 CLEC1AQ8NC01 280 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 ZCCHC10Q8TBK6 192 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 MIEF2Q96C03 454 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 FER1L6-AS2Q96M78 137 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 TSNARE1Q96NA8 513 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 RBBP8Q99708 897 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 CPNE1Q99829 537 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 LRRC4CQ9HCJ2 640 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 MLXIPLQ9NP71 852 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 TRPC4Q9UBN4 977 aa17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 ZNF282Q9UDV7 671 aaPredicted RBP17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 NXT1Q9UKK6 140 aaKnown RBP17.98■□□□□ 0.47
LPCAT1-206ENST00000514484 LCMT2O60294 686 aaKnown RBP17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 WISP3O95389 354 aaPredicted RBP17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 HRH2P25021 359 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 GP5P40197 560 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 EMP3P54852 163 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 MAT1AQ00266 395 aaKnown RBP17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 POU4F1Q01851 419 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 GUCY2DQ02846 1103 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 DSG2Q14126 1118 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 USP10Q14694 798 aaKnown RBP17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 WHAMMP3Q1A5X7 153 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 C18orf21Q32NC0 220 aaPredicted RBP17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 CATSPEREQ5SY80 951 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 GARNL3Q5VVW2 1013 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 FRA10AC1Q70Z53 315 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 LAPTM4BQ86VI4 370 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 SHISA5Q8N114 240 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 PPM1NQ8N819 430 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 OR9A4Q8NGU2 314 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 FBF1Q8TES7 1133 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 GPR22Q99680 433 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 EGFL8Q99944 293 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 HAUS8Q9BT25 410 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 PHACTR1Q9C0D0 580 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 SPNS1Q9H2V7 528 aa17.97■□□□□ 0.47
LPCAT1-206ENST00000514484 LUZP4Q9P127 313 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms