RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 L3HYPDHQ96EM0 354 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 LINGO1Q96FE5 620 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 TCTN2Q96GX1 697 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 HIST1H2AHQ96KK5 128 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 CNDP1Q96KN2 507 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 CCDC138Q96M89 665 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 PPM1MQ96MI6 270 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 OR6C1Q96RD1 312 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 PKP4Q99569 1192 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 HIST1H2AJQ99878 128 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 CTRCQ99895 268 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 H2AFJQ9BTM1 129 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 TRMOQ9BU70 441 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 TRIM54Q9BYV2 358 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 SPRY4Q9C004 299 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 PARVBQ9HBI1 364 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 GPAMQ9HCL2 828 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 FOXJ2Q9P0K8 574 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 XPR1Q9UBH6 696 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 CIDEBQ9UHD4 219 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 ZFP69BQ9UJL9 534 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 DCTN4Q9UJW0 460 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 RARRES3Q9UL19 164 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 RAP2CQ9Y3L5 183 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 CAPN7Q9Y6W3 813 aa8.01□□□□□ -1.13
CCL28-204ENST00000514421 FRYQ5TBA9 3013 aa8□□□□□ -1.13
CCL28-204ENST00000514421 A0A0J9YY10 115 aa8□□□□□ -1.13
CCL28-204ENST00000514421 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8□□□□□ -1.13
CCL28-204ENST00000514421 STMND1H3BQB6 276 aa8□□□□□ -1.13
CCL28-204ENST00000514421 MGRN1O60291 552 aa8□□□□□ -1.13
CCL28-204ENST00000514421 LYPLA1O75608 230 aaPredicted RBP8□□□□□ -1.13
CCL28-204ENST00000514421 IPO13O94829 963 aaKnown RBP8□□□□□ -1.13
CCL28-204ENST00000514421 TSPAN12O95859 305 aa8□□□□□ -1.13
CCL28-204ENST00000514421 EBLN1P0CF75 366 aa8□□□□□ -1.13
CCL28-204ENST00000514421 CCDC166P0CW27 439 aa8□□□□□ -1.13
CCL28-204ENST00000514421 NQO1P15559 274 aaKnown RBP8□□□□□ -1.13
CCL28-204ENST00000514421 ST6GAL1P15907 406 aa8□□□□□ -1.13
CCL28-204ENST00000514421 PEBP1P30086 187 aaKnown RBP8□□□□□ -1.13
CCL28-204ENST00000514421 IDH3AP50213 366 aa8□□□□□ -1.13
CCL28-204ENST00000514421 AQP5P55064 265 aa8□□□□□ -1.13
CCL28-204ENST00000514421 NAA20P61599 178 aa8□□□□□ -1.13
CCL28-204ENST00000514421 SP140Q13342 867 aa8□□□□□ -1.13
CCL28-204ENST00000514421 ZNF460Q14592 562 aa8□□□□□ -1.13
CCL28-204ENST00000514421 LARP7Q4G0J3 582 aaKnown RBP eCLIP8□□□□□ -1.13
CCL28-204ENST00000514421 EEF1AKMT2Q5JPI9 291 aaKnown RBP8□□□□□ -1.13
CCL28-204ENST00000514421 KLC3Q6P597 504 aa8□□□□□ -1.13
CCL28-204ENST00000514421 ZFAND4Q86XD8 727 aa8□□□□□ -1.13
CCL28-204ENST00000514421 C10orf67Q8IYJ2 551 aa8□□□□□ -1.13
CCL28-204ENST00000514421 LMNTD1Q8N9Z9 388 aa8□□□□□ -1.13
CCL28-204ENST00000514421 ANKRD49Q8WVL7 239 aa8□□□□□ -1.13
CCL28-204ENST00000514421 KCNE4Q8WWG9 221 aa8□□□□□ -1.13
CCL28-204ENST00000514421 DLG3Q92796 817 aa8□□□□□ -1.13
CCL28-204ENST00000514421 THOC1Q96FV9 657 aaKnown RBP8□□□□□ -1.13
CCL28-204ENST00000514421 NAF1Q96HR8 494 aaKnown RBP8□□□□□ -1.13
CCL28-204ENST00000514421 CCDC106Q9BWC9 280 aa8□□□□□ -1.13
CCL28-204ENST00000514421 C1QTNF3Q9BXJ4 246 aa8□□□□□ -1.13
CCL28-204ENST00000514421 DERL2Q9GZP9 239 aa8□□□□□ -1.13
CCL28-204ENST00000514421 NMUR2Q9GZQ4 415 aa8□□□□□ -1.13
CCL28-204ENST00000514421 ILKAPQ9H0C8 392 aaPredicted RBP8□□□□□ -1.13
CCL28-204ENST00000514421 APMAPQ9HDC9 416 aa8□□□□□ -1.13
CCL28-204ENST00000514421 FGF21Q9NSA1 209 aa8□□□□□ -1.13
CCL28-204ENST00000514421 INTS7Q9NVH2 962 aaKnown RBP8□□□□□ -1.13
CCL28-204ENST00000514421 SOHLH2Q9NX45 425 aa8□□□□□ -1.13
CCL28-204ENST00000514421 CPSF2Q9P2I0 782 aaKnown RBP8□□□□□ -1.13
CCL28-204ENST00000514421 VTI1BQ9UEU0 232 aa8□□□□□ -1.13
CCL28-204ENST00000514421 SERTAD3Q9UJW9 196 aa8□□□□□ -1.13
CCL28-204ENST00000514421 PDE10AQ9Y233 779 aa8□□□□□ -1.13
CCL28-204ENST00000514421 DMXL2Q8TDJ6 3036 aa8□□□□□ -1.13
CCL28-204ENST00000514421 SPTBP11277 2137 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 PABPN1LA6NDY0 278 aaKnown RBP7.99□□□□□ -1.13
CCL28-204ENST00000514421 A8MT66 165 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 E7ENX8 843 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 FCHO1O14526 889 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 SLC22A2O15244 555 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 HDAC3O15379 428 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 KLK10O43240 276 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 KLK8O60259 260 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 SLC16A8O95907 504 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 ENO2P09104 434 aaPredicted RBP7.99□□□□□ -1.13
CCL28-204ENST00000514421 MSL3P1P0C860 447 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 LIPCP11150 499 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 ERGP11308 486 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 PVRP15151 417 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 CD1DP15813 335 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 TFEBP19484 476 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 IMPDH1P20839 514 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 CALB2P22676 271 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 PTPN4P29074 926 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 CMPK1P30085 196 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 ADSLP30566 484 aaPredicted RBP7.99□□□□□ -1.13
CCL28-204ENST00000514421 RPL14P50914 215 aaKnown RBP7.99□□□□□ -1.13
CCL28-204ENST00000514421 PGGT1BP53609 377 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 PNLIPRP1P54315 467 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 NAGLUP54802 743 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 AP1S2P56377 157 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 ATP6V0D1P61421 351 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 ABATP80404 500 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 TAP2Q03519 686 aa7.99□□□□□ -1.13
CCL28-204ENST00000514421 SF3A3Q12874 501 aaKnown RBP eCLIP7.99□□□□□ -1.13
CCL28-204ENST00000514421 CLN3Q13286 438 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms