RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 IRS2Q9Y4H2 1338 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TBC1D3DA0A087WVF3 549 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TBC1D3IA0A087WXS9 549 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TBC1D3EA0A087X179 549 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TBC1D3KA0A087X1G2 549 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 OR14I1A6ND48 311 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TBC1D3FA6NER0 549 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 HMX3A6NHT5 357 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 ISM1B1AKI9 464 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TBC1D3LB9A6J9 549 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TLR4O00206 839 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 MATN4O95460 622 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SLC35G4P0C7Q5 338 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TBC1D3HP0C7X1 549 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 ENGP17813 658 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CAPN3P20807 821 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 AGXTP21549 392 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 UQCRC1P31930 480 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 GGT5P36269 586 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 PGGT1BP53609 377 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SNRPD2P62316 118 aaKnown RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 GALNT2Q10471 571 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 GNA13Q14344 377 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 OXA1LQ15070 435 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 HLA-DQA1Q5Y7H0 255 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TBC1D3GQ6DHY5 549 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TBC1D3CQ6IPX1 549 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 GDF6Q6KF10 455 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CHMP1BQ7LBR1 199 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TBC1D3Q8IZP1 549 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SIMC1Q8NDZ2 872 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SETD6Q8TBK2 473 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 ADAMTS16Q8TE57 1224 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 RFKQ969G6 155 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CREB3L1Q96BA8 519 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 HSH2DQ96JZ2 352 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 POLR2J3Q9H1A7 115 aaKnown RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CCSER2Q9H7U1 834 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 MRM3Q9HC36 420 aaKnown RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CD93Q9NPY3 652 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 DNAJC11Q9NVH1 559 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 HCN2Q9UL51 889 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 ASF1AQ9Y294 204 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CCDC88AQ3V6T2 1871 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 M0R233 179 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 GNB5O14775 395 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CNTN5O94779 1100 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 PTPN2P17706 415 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 PRKAG1P54619 331 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 PITPNAQ00169 270 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SEMA3AQ14563 771 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 LRRC66Q68CR7 880 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TSPYL5Q86VY4 417 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SPAG16Q8N0X2 631 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 KREMEN2Q8NCW0 462 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 PAPD5Q8NDF8 572 aaKnown RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 ASB12Q8WXK4 309 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF778Q96MU6 729 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CTRCQ99895 268 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 EVA1BQ9NVM1 165 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 IL37Q9NZH6 218 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SEC14L3Q9UDX4 400 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CYTH4Q9UIA0 394 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 L7N2F9 121 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 HCRTO43612 131 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 STBD1O95210 358 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 APODP05090 189 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 HLA-DQB2P05538 268 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 BMP4P12644 408 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 FAM124AQ86V42 546 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 TIGD4Q8IY51 512 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 FAM109AQ8N4B1 249 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 C1QTNF1Q9BXJ1 281 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 MAGEH1Q9H213 219 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 RHBGQ9H310 441 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 MIOSQ9NXC5 875 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 DNAJC15Q9Y5T4 150 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 A0A0U1RQF3 1178 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 SLC28A2O43868 658 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ANXA4P09525 319 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 CDH4P55283 916 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 EMX1Q04741 257 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 HNRNPA0Q13151 305 aaKnown RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 RAPSNQ13702 412 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF792Q3KQV3 632 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ATG9BQ674R7 924 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 CILP2Q8IUL8 1156 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 VWA5B2Q8N398 1253 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 CPA6Q8N4T0 437 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 SCAMP5Q8TAC9 235 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 TNFAIP8L1Q8WVP5 186 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 DNAJA4Q8WW22 397 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 CLP1Q92989 425 aaKnown RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 TIFAQ96CG3 184 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 ART5Q96L15 291 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 UCK2Q9BZX2 261 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 PPIL3Q9H2H8 161 aaKnown RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 MRPS17Q9Y2R5 130 aaKnown RBP10.93□□□□□ -0.66
TCOF1-211ENST00000513346 SLC38A8A6NNN8 435 aa10.93□□□□□ -0.66
TCOF1-211ENST00000513346 CACNB4O00305 520 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms