RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 CCKBRP32239 447 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 ZNF404Q494X3 552 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 CEACAM20Q6UY09 585 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 CEP68Q76N32 757 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 ZFAND2BQ8WV99 257 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 C12orf43Q96C57 262 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 SLC45A3Q96JT2 553 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 TMEM74Q96NL1 305 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 KXD1Q9BQD3 176 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 FMN2Q9NZ56 1722 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 POP7O75817 140 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 DNAJB5O75953 348 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 SEMA3DO95025 777 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 PROZP22891 400 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 MOGSQ13724 837 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 ZNF613Q6PF04 617 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 OR8J3Q8NGG0 315 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 NFKBIDQ8NI38 313 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 C1orf216Q8TAB5 229 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 DMRTB1Q96MA1 342 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 NSUN3Q9H649 340 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 MGAT4AQ9UM21 535 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 CDC14AQ9UNH5 594 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 KCTD3Q9Y597 815 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 PARP4Q9UKK3 1724 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 F2P00734 622 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 HAPLN1P10915 354 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 ARSFP54793 590 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 SCRN3Q0VDG4 424 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 CLEC12AQ5QGZ9 265 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 TMIGD1Q6UXZ0 262 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 SDR16C5Q8N3Y7 309 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 FBXO15Q8NCQ5 510 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 RHEBL1Q8TAI7 183 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 SUN5Q8TC36 379 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 HDAC2Q92769 488 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 ALPK1Q96QP1 1244 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 TOR3AQ9H497 397 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 HCN4Q9Y3Q4 1203 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 LMO7Q8WWI1 1683 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 IFT172Q9UG01 1749 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 A0A075B6Q4 140 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 A0A1W2PRQ8 180 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 ARVCFO00192 962 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 LSM1O15116 133 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 GMFGO60234 142 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 COQ9O75208 318 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 YES1P07947 543 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 F7P08709 466 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 ITIH1P19827 911 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 LEPRP48357 1165 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 PGDP52209 483 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 TSTQ16762 297 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 GALNTL5Q7Z4T8 443 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 TXNDC5Q8NBS9 432 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 OVCA2Q8WZ82 227 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 MARCH7Q9H992 704 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 UTS2RQ9UKP6 389 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 A0A0G2JN53 185 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 FAM170BA6NMN3 283 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 RAB36O95755 333 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 RLN2P04090 185 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 MAP3K8P41279 467 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 VLDLRP98155 873 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 PUM1Q14671 1186 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 FAM189A2Q15884 450 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 PLD6Q8N2A8 252 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 TOMM5Q8N4H5 51 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 AQP11Q8NBQ7 271 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 NDC1Q9BTX1 674 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 CARS2Q9HA77 564 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 EIF3KQ9UBQ5 218 aaKnown RBP12.12□□□□□ -0.47
COL11A1-210ENST00000512756 PRKAB1Q9Y478 270 aa12.12□□□□□ -0.47
COL11A1-210ENST00000512756 EDDM13A0A1B0GTR0 161 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 MTX2O75431 263 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 APOC1P02654 83 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 RBM34P42696 430 aaKnown RBP12.11□□□□□ -0.47
COL11A1-210ENST00000512756 GDF5P43026 501 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 SEC13P55735 322 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 RPP38P78345 283 aaKnown RBP12.11□□□□□ -0.47
COL11A1-210ENST00000512756 OLIG2Q13516 323 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 RUNDC3AQ59EK9 446 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 GDF6Q6KF10 455 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-210ENST00000512756 TMCO2Q7Z6W1 182 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-210ENST00000512756 CLDN19Q8N6F1 224 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 CEP76Q8TAP6 659 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 SLC5A11Q8WWX8 675 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 BRI3BPQ8WY22 251 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 TFGQ92734 400 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-210ENST00000512756 TRMT61BQ9BVS5 477 aaKnown RBP12.11□□□□□ -0.47
COL11A1-210ENST00000512756 TAC3Q9UHF0 121 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 ZNF639Q9UID6 485 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 MGAT4BQ9UQ53 548 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 RNF11Q9Y3C5 154 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 CLCN2P51788 898 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 ZNF234Q14588 700 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 GPR68Q15743 365 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 PLEKHS1Q5SXH7 462 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 ATG9BQ674R7 924 aa12.11□□□□□ -0.47
COL11A1-210ENST00000512756 LRRC66Q68CR7 880 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms