RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 IQCF5A8MTL0 148 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 CDC7O00311 574 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 KATNA1O75449 491 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 PSIP1O75475 530 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 LYPLA1O75608 230 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 STK17BO94768 372 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 SORBS2O94875 1100 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 SERPINA6P08185 405 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 VCLP18206 1134 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 AKT1P31749 480 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 GPR1P46091 355 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 AQP5P55064 265 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 PKNOX1P55347 436 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 DMPKQ09013 629 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 BIRC2Q13490 618 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 TUBB3Q13509 450 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 INPP5AQ14642 412 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 NFATC4Q14934 902 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 ZXDCQ2QGD7 858 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 KHDC1Q4VXA5 237 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 SP5Q6BEB4 398 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 PNCKQ6P2M8 343 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 CLNKQ7Z7G1 428 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 ADGRG6Q86SQ4 1221 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 SLC22A15Q8IZD6 547 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 FITM2Q8N6M3 262 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 ZNF781Q8N8C0 355 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 RASGEF1AQ8N9B8 481 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 RFWD2Q8NHY2 731 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 OR1E3Q8WZA6 343 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 SCARF2Q96GP6 870 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 MAGEB10Q96LZ2 347 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 WDR92Q96MX6 357 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 ZNF382Q96SR6 550 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 CCM2Q9BSQ5 444 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 MFRPQ9BY79 579 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 TMEM168Q9H0V1 697 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 APMAPQ9HDC9 416 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 PCTPQ9UKL6 214 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 ST14Q9Y5Y6 855 aa10.12□□□□□ -0.79
PDLIM5-217ENST00000512274 HIVEP3Q5T1R4 2406 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 A0A0G2JND7 137 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 A6NCN8 305 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 NPEPPSL1A6NEC2 478 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 ERICH4A6NGS2 130 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 SUPT3HB4E1H0 165 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 UBXN8O00124 270 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 E2F3O00716 465 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 GRID2O43424 1007 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 SNX2O60749 519 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 SUPT3HO75486 399 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 CDK14O94921 469 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 ESRRBO95718 433 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 PCCBP05166 539 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 CHRNGP07510 517 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 GFAPP14136 432 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 PCSK2P16519 638 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 DLSTP36957 453 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 MRPL19P49406 292 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 RAB15P59190 212 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 CDK3Q00526 305 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 TRA2AQ13595 282 aaKnown RBP eCLIP10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 GTF2H3Q13889 308 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 PFKFB4Q16877 469 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 WSCD2Q2TBF2 565 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 CRTC2Q53ET0 693 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 RAET1GQ6H3X3 334 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 MAVSQ7Z434 540 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 CUZD1Q86UP6 607 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 CLYBLQ8N0X4 340 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 PLA2G15Q8NCC3 412 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 OR4D9Q8NGE8 314 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 HM13Q8TCT9 377 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 ACTRT2Q8TDY3 377 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 RHBDF1Q96CC6 855 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 C19orf60Q96EN9 201 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 TRIM54Q9BYV2 358 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 ZNF395Q9H8N7 513 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 COG4Q9H9E3 785 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 MEAF6Q9HAF1 191 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 PARVBQ9HBI1 364 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 SLAMF7Q9NQ25 335 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 ABCF3Q9NUQ8 709 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 TMEM45AQ9NWC5 275 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 DCTN4Q9UJW0 460 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 SPENQ96T58 3664 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 POLQO75417 2590 aa10.11□□□□□ -0.79
PDLIM5-217ENST00000512274 GOLGA8QA0A0J9YX86 632 aa10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 GOLGA8OA6NCC3 632 aa10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 MGAT4DA6NG13 374 aa10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 CAPN14A8MX76 684 aa10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 B4E171 279 aa10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 GOLGA8NF8WBI6 632 aa10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 UNC5CO95185 931 aa10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 ENO1P06733 434 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 ANXA5P08758 320 aa10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 THRAP10827 490 aa10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 MYCLP1P12525 358 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 CYP2A7P20853 494 aa10.1□□□□□ -0.79
PDLIM5-217ENST00000512274 CSF2RBP32927 897 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms