RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 COQ3Q9NZJ6 369 aa17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 TSR3Q9UJK0 312 aaKnown RBP17.92■□□□□ 0.46
HMGCS1-206ENST00000511774 FAM155BO75949 473 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 DRD2P14416 443 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 ZNF24P17028 368 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 CMPK1P30085 196 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 GDF10P55107 478 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 GARNL3Q5VVW2 1013 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 SLC25A25Q6KCM7 469 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 AFTPHQ6ULP2 937 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 PLD3Q8IV08 490 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 CCDC71Q8IV32 467 aaPredicted RBP17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 FAM71DQ8N9W8 422 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 FAM57AQ8TBR7 257 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 ALS2CR12Q96Q35 445 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 GNPTGQ9UJJ9 305 aa17.91■□□□□ 0.46
HMGCS1-206ENST00000511774 A0A1B0GTH9 108 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 HOXD4P09016 255 aaPredicted RBP17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 ERGP11308 486 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 OC90Q02509 493 aaPredicted RBP17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 ACVR1Q04771 509 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 MAPKAPK3Q16644 382 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 MINDY4Q4G0A6 757 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 TSTD2Q5T7W7 516 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 SPNS2Q8IVW8 549 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 OR4L1Q8NH43 312 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 METTL21AQ8WXB1 218 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 CCDC42Q96M95 316 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 PPP1R2P1Q96PQ5 205 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 FERMT1Q9BQL6 677 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 OSBPL8Q9BZF1 889 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 MRPS30Q9NP92 439 aaKnown RBP17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 ABHD10Q9NUJ1 306 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 INTUQ9ULD6 942 aa17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.9■□□□□ 0.46
HMGCS1-206ENST00000511774 SOWAHDA6NJG2 315 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 TMEM200CA6NKL6 621 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 NME2P1O60361 137 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 MBD3O95983 291 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 TPOP07202 933 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 NME2P22392 152 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 RFC3P40938 356 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 GRIA1P42261 906 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 CEBPEQ15744 281 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 MFSD4BQ5TF39 518 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 TTC23LQ6PF05 361 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 KIF2BQ8N4N8 673 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 M1APQ8TC57 530 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 CCDC138Q96M89 665 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 P2RY12Q9H244 342 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 MMP25Q9NPA2 562 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 ZNF358Q9NW07 568 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 SPATA7Q9P0W8 599 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 HCN3Q9P1Z3 774 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 LRFN1Q9P244 771 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 KCNN3Q9UGI6 736 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 PCYOX1Q9UHG3 505 aa17.89■□□□□ 0.45
HMGCS1-206ENST00000511774 ARHGEF33A8MVX0 844 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 FOXO6A8MYZ6 492 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 HAT1O14929 419 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 VPS26AO75436 327 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 SLC25A12O75746 678 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 CHRNB4P30926 498 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 PTGS2P35354 604 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 COPS2P61201 443 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 FAM53BQ14153 422 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 TMED2Q15363 201 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 EMC4Q5J8M3 183 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 OR6P1Q8NGX9 317 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 SKA2Q8WVK7 121 aaPredicted RBP17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 OLFM1Q99784 485 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 SMR3AQ99954 134 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 MACROD1Q9BQ69 325 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 CDCP1Q9H5V8 836 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 TAC3Q9UHF0 121 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 EFR3BQ9Y2G0 817 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 CSPG4Q6UVK1 2322 aa17.88■□□□□ 0.45
HMGCS1-206ENST00000511774 PRMT5O14744 637 aaPredicted RBP17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 CTNNA2P26232 953 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 PTPN7P35236 360 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 XCR1P46094 333 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 DLX5P56178 289 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 PPP2R2AP63151 447 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 SFT2D3Q587I9 215 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 CMPK2Q5EBM0 449 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 C11orf63Q6NUN7 778 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 CAVIN1Q6NZI2 390 aaKnown RBP17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 PAPD4Q6PIY7 484 aaKnown RBP17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 Q71RC1 249 aaPredicted RBP17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 VN1R4Q7Z5H5 301 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 FAM98AQ8NCA5 519 aaKnown RBP17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 PPFIBP2Q8ND30 876 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 CHDHQ8NE62 594 aaPredicted RBP17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 OR51Q1Q8NH59 317 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 ASB5Q8WWX0 329 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 TSLPQ969D9 159 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 SEC16BQ96JE7 1060 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 GBP4Q96PP9 640 aa17.87■□□□□ 0.45
HMGCS1-206ENST00000511774 TSSK1BQ9BXA7 367 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms