RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 IFNKQ9P0W0 207 aa8.87□□□□□ -0.99
NEDD9-211ENST00000508546 SPATA7Q9P0W8 599 aa8.87□□□□□ -0.99
NEDD9-211ENST00000508546 C19orf25Q9UFG5 118 aaPredicted RBP8.87□□□□□ -0.99
NEDD9-211ENST00000508546 KCNN3Q9UGI6 736 aa8.87□□□□□ -0.99
NEDD9-211ENST00000508546 RIMKLBQ9ULI2 386 aa8.87□□□□□ -0.99
NEDD9-211ENST00000508546 MPDZO75970 2070 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 A0A0A6YYC8 382 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 MACROD2A1Z1Q3 448 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 IQCF5A8MTL0 148 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 I3L1I5 382 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 KPNA5O15131 536 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 PSMD3O43242 534 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 NEURL1O76050 574 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 SUN1O94901 812 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 GOT2P00505 430 aaKnown RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 PTMAP06454 111 aaKnown RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 SP1P08047 785 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 ERGP11308 486 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 PKMP14618 531 aaKnown RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 CTNNA2P26232 953 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 CDC25BP30305 580 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 CCNFP41002 786 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 AGTR2P50052 363 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 YBX1P67809 324 aaKnown RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 ACVR1Q04771 509 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 TRIM14Q14142 442 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 EXT1Q16394 746 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 SYT16Q17RD7 645 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 HKDC1Q2TB90 917 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 CCSMST1Q4G0I0 132 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 CES4AQ5XG92 561 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 FCRLBQ6BAA4 426 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 SPINK14Q6IE38 97 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 SLC25A25Q6KCM7 469 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 C3P1Q6ZMU1 363 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 LANCL3Q6ZV70 420 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 FGD2Q7Z6J4 655 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 LINC00523Q86TU6 105 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 BIVMQ86UB2 503 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 PAQR7Q86WK9 346 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 CRLF3Q8IUI8 442 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 LGI4Q8N135 537 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 LRRN4CLQ8ND94 238 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 OR4L1Q8NH43 312 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 LILRB4Q8NHJ6 448 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 GSDMBQ8TAX9 411 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 M1APQ8TC57 530 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 MAGEC3Q8TD91 643 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 KRT35Q92764 455 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 NINJ1Q92982 152 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 OR2A5Q96R48 311 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 OLFM1Q99784 485 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 ZNF559Q9BR84 538 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 OSBPL8Q9BZF1 889 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 SYNPO2LQ9H987 977 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 KCNK13Q9HB14 408 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 SLC24A3Q9HC58 644 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 MRPS30Q9NP92 439 aaKnown RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 MMP25Q9NPA2 562 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 PIH1D1Q9NWS0 290 aaKnown RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 UTP6Q9NYH9 597 aaKnown RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 TTC7AQ9ULT0 858 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-211ENST00000508546 NFS1Q9Y697 457 aa8.86□□□□□ -0.99
NEDD9-211ENST00000508546 ARHGAP21Q5T5U3 1957 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 EML6Q6ZMW3 1958 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 IGHV3-20A0A0C4DH32 117 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 IGKV1-8A0A0C4DH67 115 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 A0A0U1RQJ8 604 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 KRT87PA6NCN2 255 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 SOWAHDA6NJG2 315 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 GABRR3A8MPY1 467 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 GOLGA6L6A8MZA4 724 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 H0YIG0 161 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 PRMT5O14744 637 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-211ENST00000508546 ZNHIT1O43257 154 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 CBFA2T2O43439 604 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 TOXO94900 526 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 METTL18O95568 372 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 HOXD4P09016 255 aaPredicted RBP8.85□□□□□ -0.99
NEDD9-211ENST00000508546 EZRP15311 586 aaKnown RBP8.85□□□□□ -0.99
NEDD9-211ENST00000508546 ZNF24P17028 368 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 MSX1P28360 303 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 CHRNB4P30926 498 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 BDKRB1P46663 353 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 HSF1Q00613 529 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 FOLH1Q04609 750 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 FASTKQ14296 549 aaKnown RBP8.85□□□□□ -0.99
NEDD9-211ENST00000508546 SEMA3AQ14563 771 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 NDUFA9Q16795 377 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 P3H1Q32P28 736 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 CCDC38Q502W7 563 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 FASTKD1Q53R41 847 aaKnown RBP8.85□□□□□ -0.99
NEDD9-211ENST00000508546 RNFT1Q5M7Z0 435 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 TSTD2Q5T7W7 516 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 TMEM211Q6ICI0 200 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 ZNF425Q6IV72 752 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 C11orf63Q6NUN7 778 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 ZNF534Q76KX8 674 aa8.85□□□□□ -0.99
NEDD9-211ENST00000508546 PCGF5Q86SE9 256 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms