RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 FFAR2O15552 330 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 CLDN11O75508 207 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 SLC25A12O75746 678 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 SPARCP09486 303 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 GKN3PP0CG01 181 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 G6PDP11413 515 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 UGT2B10P36537 528 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 SSR2P43308 183 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 FNTBP49356 437 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 NUMBP49757 651 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 CDH11P55287 796 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 PRR5P85299 388 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 NFKB2Q00653 900 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 SREBF2Q12772 1141 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 SF3A2Q15428 464 aaKnown RBP7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 SPHARQ15513 63 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 ESCO2Q56NI9 601 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 NKAPLQ5M9Q1 402 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 UBAP2Q5T6F2 1119 aaKnown RBP7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 HACD4Q5VWC8 232 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 KIAA1161Q6NSJ0 714 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 BLOC1S3Q6QNY0 202 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 ARL9Q6T311 187 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 SNX20Q7Z614 316 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 KIAA0319LQ8IZA0 1049 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 FTMTQ8N4E7 242 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 C1orf127Q8N9H9 656 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 ZSCAN1Q8NBB4 408 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 NEIL3Q8TAT5 605 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 ADAMTS16Q8TE57 1224 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 AKT1S1Q96B36 256 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 PTERQ96BW5 349 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 RGCCQ9H4X1 137 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 TMEM184CQ9NVA4 438 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 CYTH4Q9UIA0 394 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 C9IYK1 514 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 KRBOX1C9JBD0 128 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 FLRT2O43155 660 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 LRRTM2O43300 516 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 PPM1BO75688 479 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 ALX3O95076 343 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 SIX3O95343 332 aaPredicted RBP7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 C22orf31O95567 290 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 PIGRP01833 764 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 MT-ND5P03915 603 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 ZNF286BP0CG31 522 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 HOXD8P13378 290 aaPredicted RBP7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 NRIP1P48552 1158 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 PAFAH1B3Q15102 231 aaKnown RBP7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 PROX2Q3B8N5 592 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 CYBRD1Q53TN4 286 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 ATAD3CQ5T2N8 411 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 MPP7Q5T2T1 576 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 MAP1SQ66K74 1059 aaPredicted RBP7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 TXNRD3NBQ6F5E7 133 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 C16orf59Q7L2K0 433 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 TMPRSS11BQ86T26 416 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 SNX29P2Q8IUI4 249 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 LACC1Q8IV20 430 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 C2CD4AQ8NCU7 369 aaPredicted RBP7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 DDX1Q92499 740 aaKnown RBP7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 GTF2H4Q92759 462 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 RANBP9Q96S59 729 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 SLC29A1Q99808 456 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 EBPLQ9BY08 206 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 ELL3Q9HB65 397 aaPredicted RBP7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 NLKQ9UBE8 527 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 CDH7Q9ULB5 785 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 ERVW-1Q9UQF0 538 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 PCDHB9Q9Y5E1 797 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 RAI2Q9Y5P3 530 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 NR2E3Q9Y5X4 410 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 NUBP2Q9Y5Y2 271 aa7.12□□□□□ -1.27
UBE2D3-224ENST00000508474 TCRBV3S1A0A5B6 114 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 GRXCR2A6NFK2 248 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CLDN24A6NM45 220 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 EEF1E1O43324 174 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 TLX2O43763 284 aaPredicted RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 GMDSO60547 372 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 MATN4O95460 622 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 LGALS2P05162 132 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 NUDT7P0C024 238 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CTPS1P17812 591 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 GGT1P19440 569 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ENDOUP21128 410 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 GADD45AP24522 165 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CD6P30203 668 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CA5AP35218 305 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 MS4A2Q01362 244 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 CD47Q08722 323 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 PPP1R8Q12972 351 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 GK2Q14410 553 aaPredicted RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 SPIN4Q56A73 249 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 SLC25A25Q6KCM7 469 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ZCCHC12Q6PEW1 402 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 WDR53Q7Z5U6 358 aaPredicted RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 ZNF227Q86WZ6 799 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 PLD6Q8N2A8 252 aaKnown RBP7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 SAMD12Q8N8I0 201 aa7.11□□□□□ -1.27
UBE2D3-224ENST00000508474 FBXO27Q8NI29 283 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms