RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 TXLNGQ9NUQ3 528 aa17.42■□□□□ 0.38
PDLIM7-216ENST00000506537 TLK1Q9UKI8 766 aa17.42■□□□□ 0.38
PDLIM7-216ENST00000506537 ASB1Q9Y576 335 aa17.42■□□□□ 0.38
PDLIM7-216ENST00000506537 FASNP49327 2511 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-216ENST00000506537 A0A1B0GX78 115 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 FEZF1A0PJY2 475 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 UBXN8O00124 270 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 DSCR3O14972 297 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 LCMT2O60294 686 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 WDR47O94967 919 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 KLHL2O95198 593 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 STATHP02808 62 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 SHBGP04278 402 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 ATXN8OSP0DMR3 200 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 PRKAR1AP10644 381 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 PTPN4P29074 926 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 DEKP35659 375 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 GGT5P36269 586 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 ARSFP54793 590 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 SNRPNP63162 240 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 SLC9A5Q14940 896 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 CDKL4Q5MAI5 379 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 YOD1Q5VVQ6 348 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 ADGRD1Q6QNK2 874 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 ENDOVQ8N8Q3 282 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 OR4K1Q8NGD4 311 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 STAG3L4Q8TBR4 150 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 ESAMQ96AP7 390 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 GPR87Q9BY21 358 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 VPS11Q9H270 941 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 ZNF358Q9NW07 568 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 WWOXQ9NZC7 414 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 NUDT4Q9NZJ9 180 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 CD274Q9NZQ7 290 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 KCND3Q9UK17 655 aa17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 PTBP2Q9UKA9 531 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 RUVBL1Q9Y265 456 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-216ENST00000506537 HYKKA2RU49 373 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 SUPT3HB4E1H0 165 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 CNOT3O75175 753 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 SUPT3HO75486 399 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 SNRPAP09012 282 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 FURINP09958 794 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 RAB40ALP0C0E4 278 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 MTHFD2P13995 350 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 ALAS2P22557 587 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 HSPA7P48741 367 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 CCR8P51685 355 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 RPS15AP62244 130 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 DCDP81605 110 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 CDC20Q12834 499 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 IL10RAQ13651 578 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 NCF4Q15080 339 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 FAM83EQ2M2I3 478 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 NKAIN1Q4KMZ8 207 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 SULT1C3Q6IMI6 304 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 PCSK4Q6UW60 755 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 TCAIMQ8N3R3 496 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 METTL27Q8N6F8 245 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 ZNF740Q8NDX6 193 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 TTC9Q92623 222 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 NLNQ9BYT8 704 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 FETUBQ9UGM5 382 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 NDOR1Q9UHB4 597 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 FARSAQ9Y285 508 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 DYRK1BQ9Y463 629 aa17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 SMG1Q96Q15 3661 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-216ENST00000506537 KCNE1BA0A087WTH5 132 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 CREG1O75629 220 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 RFPL1O75677 317 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 AGXTP21549 392 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 AGTR2P50052 363 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 FOXL2P58012 376 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 REEP5Q00765 189 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 ACAP2Q15057 778 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 ERCC6LQ2NKX8 1250 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 TECRLQ5HYJ1 363 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 COX15Q7KZN9 410 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 TMPRSS11BQ86T26 416 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 TMEM151BQ8IW70 566 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 RHEBL1Q8TAI7 183 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 UBLCP1Q8WVY7 318 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 RERGQ96A58 199 aaPredicted RBP17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 CABS1Q96KC9 395 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 MACROD1Q9BQ69 325 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 SARGQ9BW04 601 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 PELI2Q9HAT8 420 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 MRPS2Q9Y399 296 aaKnown RBP17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 KCNE2Q9Y6J6 123 aa17.39■□□□□ 0.37
PDLIM7-216ENST00000506537 TRBC2A0A5B9 178 aa17.38■□□□□ 0.37
PDLIM7-216ENST00000506537 C9J4A7 227 aa17.38■□□□□ 0.37
PDLIM7-216ENST00000506537 PRAMEF4O60810 478 aa17.38■□□□□ 0.37
PDLIM7-216ENST00000506537 IPO13O94829 963 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-216ENST00000506537 ONECUT2O95948 504 aa17.38■□□□□ 0.37
PDLIM7-216ENST00000506537 S100BP04271 92 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-216ENST00000506537 EPORP19235 508 aa17.38■□□□□ 0.37
PDLIM7-216ENST00000506537 VARSP26640 1264 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-216ENST00000506537 OR1D4P47884 311 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms