RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 C17orf64Q86WR6 236 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 LRRC56Q8IYG6 542 aaPredicted RBP6.96□□□□□ -1.3
GYPB-206ENST00000506516 DSELQ8IZU8 1212 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 SPATA6LQ8N4H0 392 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 TBC1D19Q8N5T2 526 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 TTC29Q8NA56 475 aaPredicted RBP6.96□□□□□ -1.3
GYPB-206ENST00000506516 LRRN4CLQ8ND94 238 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 OR56A3Q8NH54 315 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 UHMK1Q8TAS1 419 aaKnown RBP6.96□□□□□ -1.3
GYPB-206ENST00000506516 PROKR1Q8TCW9 393 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 MR1Q95460 341 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 KIAA1191Q96A73 305 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 UBXN10Q96LJ8 280 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 TSNARE1Q96NA8 513 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 PRAP1Q96NZ9 151 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 PAFAH2Q99487 392 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 SGPP1Q9BX95 441 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 CAPS2Q9BXY5 557 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 NLNQ9BYT8 704 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 SPRTNQ9H040 489 aaPredicted RBP6.96□□□□□ -1.3
GYPB-206ENST00000506516 CNOT10Q9H9A5 744 aaKnown RBP6.96□□□□□ -1.3
GYPB-206ENST00000506516 CPNE5Q9HCH3 593 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 SNX15Q9NRS6 342 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 ZNF180Q9UJW8 692 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 CROTQ9UKG9 612 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 RNF112Q9ULX5 631 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 SRPK3Q9UPE1 567 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 KCNE2Q9Y6J6 123 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 PIKFYVEQ9Y2I7 2098 aa6.96□□□□□ -1.3
GYPB-206ENST00000506516 A0A096LPK6 155 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 IQANK1A0A1B0GTG1 560 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 HYKKA2RU49 373 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 ZNF891A8MT65 544 aaPredicted RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 TERTO14746 1132 aaKnown RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 EFSO43281 561 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 HCRTR1O43613 425 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 CTSVO60911 334 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 H2AFYO75367 372 aaKnown RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 KLHL2O95198 593 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 WISP3O95389 354 aaPredicted RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 TUBBP07437 444 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 SNRPAP09012 282 aaKnown RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 RAB40ALP0C0E4 278 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 SLC35E2BP0CK96 405 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 COL6A2P12110 1019 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 LIFP15018 202 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 PCSK2P16519 638 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 CCR8P51685 355 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 VSX2P58304 361 aaPredicted RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 RPS15AP62244 130 aaKnown RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 YBX1P67809 324 aaKnown RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 DCDP81605 110 aaKnown RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 GPS2Q13227 327 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 BMPR2Q13873 1038 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 SLC29A2Q14542 456 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 ACAP2Q15057 778 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 TGFBIQ15582 683 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 PPP1R3AQ16821 1122 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 SAMD5Q5TGI4 173 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 PRAMEF17Q5VTA0 474 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 SULT1C3Q6IMI6 304 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 ZNF425Q6IV72 752 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 FAM199XQ6PEV8 388 aaPredicted RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 DNAJC14Q6Y2X3 702 aaPredicted RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 RNF44Q7L0R7 432 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 CMC1Q7Z7K0 106 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 ISCA2Q86U28 154 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 THOC6Q86W42 341 aaKnown RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 PAQR7Q86WK9 346 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 ZNF655Q8N720 491 aaPredicted RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 SLC38A9Q8NBW4 561 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 SNRNP27Q8WVK2 155 aaKnown RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 UBLCP1Q8WVY7 318 aaPredicted RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 PYCR2Q96C36 320 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 RHBDF1Q96CC6 855 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 NXNL1Q96CM4 212 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 MTBPQ96DY7 904 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 SLC45A3Q96JT2 553 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 CABS1Q96KC9 395 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 TXLNGYQ9BZA5 131 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 VPS11Q9H270 941 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 PRORYQ9H606 182 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 ALG9Q9H6U8 611 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 ANKZF1Q9H8Y5 726 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 SLC6A20Q9NP91 592 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 ENAMQ9NRM1 1142 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 PCMTD2Q9NV79 361 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 CUEDC1Q9NWM3 386 aaPredicted RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 CD274Q9NZQ7 290 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 FETUBQ9UGM5 382 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 NDOR1Q9UHB4 597 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 GPN3Q9UHW5 284 aaPredicted RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 IKZF3Q9UKT9 509 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 CDC14AQ9UNH5 594 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 SLC22A14Q9Y267 594 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 FARSAQ9Y285 508 aaKnown RBP6.95□□□□□ -1.3
GYPB-206ENST00000506516 CELSR3Q9NYQ7 3312 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 CFAP47Q6ZTR5 3102 aa6.95□□□□□ -1.3
GYPB-206ENST00000506516 KCNE1BA0A087WTH5 132 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 IGKV1-8A0A0C4DH67 115 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms