RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CD8B2A6NJW9 211 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 AHRRA9YTQ3 701 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 VWC2LB2RUY7 222 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 CFAP99D6REC4 459 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 CDC7O00311 574 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 NDC80O14777 642 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 AURKAO14965 403 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SNPHO15079 494 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 FGF10O15520 208 aaPredicted RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SSX4O60224 188 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 STX10O60499 249 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 MAFKO60675 156 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 HCN1O60741 890 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF354AO60765 605 aaPredicted RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 TNFSF13O75888 250 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 RGS9O75916 674 aaPredicted RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SMC2O95347 1197 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 IL2RAP01589 272 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 TUBB4AP04350 444 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 CYC1P08574 325 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SLC35G4P0C7Q5 338 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 KRT5P13647 590 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SLC25A16P16260 332 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 AMPD1P23109 780 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 FMO4P31512 558 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 PCK1P35558 622 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 PRCPP42785 496 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 PTPN9P43378 593 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SLCO1A2P46721 670 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 MAN2A2P49641 1150 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SLC26A5P58743 744 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 LSM11P83369 360 aaKnown RBP eCLIP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 MAT1AQ00266 395 aaKnown RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 CRYZQ08257 329 aaKnown RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 GALNT2Q10471 571 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 KIF5AQ12840 1032 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 PRKG2Q13237 762 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 PKP1Q13835 747 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 USP10Q14694 798 aaKnown RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 EXT1Q16394 746 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 FAM214AQ32MH5 1076 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 ANKRD20A8PQ5CZ79 823 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 DCAF17Q5H9S7 520 aaPredicted RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 TCTE1Q5JU00 501 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 WASHC2DQ5SRD0 308 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 ADAM5Q6NVV9 412 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 PAPD4Q6PIY7 484 aaKnown RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 WDR59Q6PJI9 974 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 TMEM220Q6QAJ8 160 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SARM1Q6SZW1 724 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 DNAJC14Q6Y2X3 702 aaPredicted RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 RGS9BPQ6ZS82 235 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 USP43Q70EL4 1123 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SLC22A16Q86VW1 577 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SCUBE1Q8IWY4 988 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 CYP4Z2PQ8N1L4 340 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 TEX26Q8N6G2 289 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF525Q8N782 197 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 ZDHHC22Q8N966 263 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 LMNTD1Q8N9Z9 388 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 LINC01555Q8NAE3 123 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 PSD4Q8NDX1 1056 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 DDHD1Q8NEL9 900 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 JOSD2Q8TAC2 188 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 ARRDC2Q8TBH0 407 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 C10orf105Q8TEF2 133 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SLC44A1Q8WWI5 657 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 RXFP2Q8WXD0 754 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 AKAP1Q92667 903 aaKnown RBP eCLIP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 NEUROG1Q92886 237 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SCYL1Q96KG9 808 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 LINC00615Q96LM1 132 aaPredicted RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 GBP4Q96PP9 640 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 TSG101Q99816 390 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SELENOSQ9BQE4 189 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 TUBGCP2Q9BSJ2 902 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 HGH1Q9BTY7 390 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 GTPBP4Q9BZE4 634 aaKnown RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SLITRK2Q9H156 845 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 MMP27Q9H306 513 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 UNKLQ9H9P5 680 aaKnown RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 MKKSQ9NPJ1 570 aaPredicted RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SEMA4BQ9NPR2 832 aaPredicted RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 METTL5Q9NRN9 209 aaKnown RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 SYBUQ9NX95 663 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 ZNF226Q9NYT6 803 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 DNPEPQ9ULA0 475 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 INTUQ9ULD6 942 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 FZD10Q9ULW2 581 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 DRG1Q9Y295 367 aaKnown RBP3.07□□□□□ -1.92
TCOF1-208ENST00000506063 PTGDR2Q9Y5Y4 395 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 DNAH7Q8WXX0 4024 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 STARD9Q9P2P6 4700 aa3.07□□□□□ -1.92
TCOF1-208ENST00000506063 IGHV4-61A0A0C4DH41 118 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 A0A1B0GVL5 298 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ATP6AP2A0A1C7CYW4 349 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ANKRD66B4E2M5 251 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 G3V3Y1 287 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 TRIM77I1YAP6 450 aa3.06□□□□□ -1.92
TCOF1-208ENST00000506063 ACOT7O00154 380 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms