RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 E2F3O00716 465 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 P2RX6O15547 441 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 FOXS1O43638 330 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 WFS1O76024 890 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 COILP38432 576 aaPredicted RBP23.43■■□□□ 1.34
HERC4-212ENST00000505760 SKIV2L2P42285 1042 aaKnown RBP23.43■■□□□ 1.34
HERC4-212ENST00000505760 FAM53BQ14153 422 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 RPUSD3Q6P087 351 aaKnown RBP23.43■■□□□ 1.34
HERC4-212ENST00000505760 CCDC137Q6PK04 289 aaKnown RBP23.43■■□□□ 1.34
HERC4-212ENST00000505760 UBE2R2Q712K3 238 aaPredicted RBP23.43■■□□□ 1.34
HERC4-212ENST00000505760 SPNS2Q8IVW8 549 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 CPNE9Q8IYJ1 553 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 SIRT6Q8N6T7 355 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 PBKQ96KB5 322 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 PRAP1Q96NZ9 151 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 OLAHQ9NV23 265 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 MKL2Q9ULH7 1088 aa23.43■■□□□ 1.34
HERC4-212ENST00000505760 MYO9AB2RTY4 2548 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 LRRTM2O43300 516 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 BMP10O95393 424 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 IMPA1P29218 277 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 SOX11P35716 441 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 DCTP40126 519 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 AVPR1BP47901 424 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 PER3P56645 1201 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 CCZ1BP86790 482 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 CCZ1P86791 482 aaPredicted RBP23.42■■□□□ 1.34
HERC4-212ENST00000505760 SYT16Q17RD7 645 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 CYHR1Q6ZMK1 362 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 RIPOR1Q6ZS17 1223 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 PIWIL4Q7Z3Z4 852 aaKnown RBP23.42■■□□□ 1.34
HERC4-212ENST00000505760 RASGEF1CQ8N431 466 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 ARHGEF39Q8N4T4 335 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 BCORP1Q8N888 145 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 CD200R1Q8TD46 325 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 PSMF1Q92530 271 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 NAP1L3Q99457 506 aaPredicted RBP23.42■■□□□ 1.34
HERC4-212ENST00000505760 PLA2G3Q9NZ20 509 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 FBXO5Q9UKT4 447 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 JRKLQ9Y4A0 524 aa23.42■■□□□ 1.34
HERC4-212ENST00000505760 HAUS5O94927 633 aa23.41■■□□□ 1.34
HERC4-212ENST00000505760 AP2B1P63010 937 aa23.41■■□□□ 1.34
HERC4-212ENST00000505760 MPP1Q00013 466 aa23.41■■□□□ 1.34
HERC4-212ENST00000505760 ZC3H7AQ8IWR0 971 aaKnown RBP23.41■■□□□ 1.34
HERC4-212ENST00000505760 LRRC56Q8IYG6 542 aaPredicted RBP23.41■■□□□ 1.34
HERC4-212ENST00000505760 SLX1AQ9BQ83 275 aa23.41■■□□□ 1.34
HERC4-212ENST00000505760 FAM167BQ9BTA0 163 aa23.41■■□□□ 1.34
HERC4-212ENST00000505760 CCDC177Q9NQR7 707 aaPredicted RBP23.41■■□□□ 1.34
HERC4-212ENST00000505760 CPAMD8Q8IZJ3 1885 aa23.41■■□□□ 1.34
HERC4-212ENST00000505760 TRAV17A0A0B4J275 112 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 EIF3FO00303 357 aaPredicted RBP23.4■■□□□ 1.34
HERC4-212ENST00000505760 STATHP02808 62 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 CELA2AP08217 269 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 ICAM2P13598 275 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 HRH2P25021 359 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 MAGEA3P43357 314 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 TNFSF10P50591 281 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 MAT1AQ00266 395 aaKnown RBP23.4■■□□□ 1.34
HERC4-212ENST00000505760 CYP1B1Q16678 543 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 HSP90AA5PQ58FG0 334 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 OR9A4Q8NGU2 314 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 METTL21AQ8WXB1 218 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 HAS2Q92819 552 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 SIGLEC10Q96LC7 697 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 AARSD1Q9BTE6 412 aaKnown RBP23.4■■□□□ 1.34
HERC4-212ENST00000505760 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.4■■□□□ 1.343e-8■■□□□ 11.7
HERC4-212ENST00000505760 ZNF700Q9H0M5 742 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 TMEM184CQ9NVA4 438 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 TRMT6Q9UJA5 497 aaKnown RBP23.4■■□□□ 1.34
HERC4-212ENST00000505760 MRPS2Q9Y399 296 aaKnown RBP23.4■■□□□ 1.34
HERC4-212ENST00000505760 NEU2Q9Y3R4 380 aa23.4■■□□□ 1.34
HERC4-212ENST00000505760 SCN3AQ9NY46 2000 aa23.39■■□□□ 1.34
HERC4-212ENST00000505760 LOC102723996A0A087X1L8 192 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 C8orf89P0DMQ9 161 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 RPS15AP62244 130 aaKnown RBP23.39■■□□□ 1.33
HERC4-212ENST00000505760 TBPL1P62380 186 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 PCOLCEQ15113 449 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 MFSD4BQ5TF39 518 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 LRRC8EQ6NSJ5 796 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 UGT3A1Q6NUS8 523 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 TMEM205Q6UW68 189 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 AGGF1Q8N302 714 aaeCLIP23.39■■□□□ 1.33
HERC4-212ENST00000505760 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.39■■□□□ 1.33
HERC4-212ENST00000505760 MCOLN3Q8TDD5 553 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 PCBD2Q9H0N5 130 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 IARS2Q9NSE4 1012 aaKnown RBP23.39■■□□□ 1.33
HERC4-212ENST00000505760 CREBBPQ92793 2442 aa23.39■■□□□ 1.33
HERC4-212ENST00000505760 CROCCQ5TZA2 2017 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 SCN2AQ99250 2005 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 H0YIG0 161 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 PGRMC1O00264 195 aaKnown RBP23.38■■□□□ 1.33
HERC4-212ENST00000505760 JRKO75564 520 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 F10P00742 488 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 ITGAMP11215 1152 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 PTK6Q13882 451 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 PALM2Q8IXS6 379 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 PPIL6Q8IXY8 311 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 NAT8LQ8N9F0 302 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 GRK7Q8WTQ7 553 aa23.38■■□□□ 1.33
HERC4-212ENST00000505760 CCDC138Q96M89 665 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms