RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 PALM2Q8IXS6 379 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 PPIL6Q8IXY8 311 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 LRRC56Q8IYG6 542 aaPredicted RBP11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 CPNE9Q8IYJ1 553 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 ARHGEF39Q8N4T4 335 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 AMER3Q8N944 861 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 NAT8LQ8N9F0 302 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 CATSPER1Q8NEC5 780 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 OR1N1Q8NGS0 311 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 CD200R1Q8TD46 325 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 METTL21AQ8WXB1 218 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 HAS2Q92819 552 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 THAP11Q96EK4 314 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 SIGLEC10Q96LC7 697 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 CCDC138Q96M89 665 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 PRAP1Q96NZ9 151 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 MESP1Q9BRJ9 268 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 AARSD1Q9BTE6 412 aaKnown RBP11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 ZNF700Q9H0M5 742 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 SYNPO2LQ9H987 977 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 CCDC177Q9NQR7 707 aaPredicted RBP11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 TMEM184CQ9NVA4 438 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 TRMT6Q9UJA5 497 aaKnown RBP11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 MKL2Q9ULH7 1088 aa11.45□□□□□ -0.58
PDLIM7-214ENST00000505746 SEC16AO15027 2179 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 LOC102723996A0A087X1L8 192 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 H0YIG0 161 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 FFAR3O14843 346 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 GPR42O15529 346 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 C8GP07360 202 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 F7P08709 466 aaPredicted RBP11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 MYBL2P10244 700 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 PGAM1P18669 254 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 IMPA1P29218 277 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 SOX11P35716 441 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 PER3P56645 1201 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 MPP1Q00013 466 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 EEF1A2Q05639 463 aaKnown RBP11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 FAAH2Q6GMR7 532 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 TMEM205Q6UW68 189 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 PLD3Q8IV08 490 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 BCORP1Q8N888 145 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 ACTRT1Q8TDG2 376 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 BRIX1Q8TDN6 353 aaKnown RBP11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 PSMF1Q92530 271 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 FAM129AQ9BZQ8 928 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 IARS2Q9NSE4 1012 aaKnown RBP11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 TAS2R13Q9NYV9 303 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 OSGIN2Q9Y236 505 aa11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 MRPS2Q9Y399 296 aaKnown RBP11.44□□□□□ -0.58
PDLIM7-214ENST00000505746 USP9YO00507 2555 aaPredicted RBP11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 TRAV17A0A0B4J275 112 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 E2F3O00716 465 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 SLC16A5O15375 505 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 P2RX6O15547 441 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 NSA2O95478 260 aaKnown RBP11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 TTC4O95801 387 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 CLDN1O95832 211 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 CYC1P08574 325 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 C8orf89P0DMQ9 161 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 CCND1P24385 295 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 GRK3P35626 688 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 TNFSF10P50591 281 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 TBPL1P62380 186 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 SP140Q13342 867 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 PPP1R7Q15435 360 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 INAQ16352 499 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 SYT16Q17RD7 645 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 RNASEH2BQ5TBB1 312 aaKnown RBP11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 PCGF5Q86SE9 256 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 ZC3H7AQ8IWR0 971 aaKnown RBP11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 MYO1HQ8N1T3 1032 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 AGGF1Q8N302 714 aaeCLIP11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 SIRT6Q8N6T7 355 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 CAMKVQ8NCB2 501 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 C2CD4AQ8NCU7 369 aaPredicted RBP11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 OR9A4Q8NGU2 314 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 SUN3Q8TAQ9 357 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 EEF1AKMT1Q8WVE0 214 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 MAGEB10Q96LZ2 347 aaPredicted RBP11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 OSBPL9Q96SU4 736 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 NAT9Q9BTE0 207 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 TUBB6Q9BUF5 446 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 PARVBQ9HBI1 364 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 OLAHQ9NV23 265 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 PLA2G3Q9NZ20 509 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 C19orf25Q9UFG5 118 aaPredicted RBP11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 TEKT2Q9UIF3 430 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 SHANK1Q9Y566 2161 aa11.43□□□□□ -0.58
PDLIM7-214ENST00000505746 USP9XQ93008 2570 aaPredicted RBP11.42□□□□□ -0.58
PDLIM7-214ENST00000505746 FER1L5A0AVI2 2057 aa11.42□□□□□ -0.58
PDLIM7-214ENST00000505746 PABPN1LA6NDY0 278 aaKnown RBP11.42□□□□□ -0.58
PDLIM7-214ENST00000505746 CES2O00748 559 aa11.42□□□□□ -0.58
PDLIM7-214ENST00000505746 LRRTM2O43300 516 aa11.42□□□□□ -0.58
PDLIM7-214ENST00000505746 HIST1H2AGP0C0S8 130 aaPredicted RBP11.42□□□□□ -0.58
PDLIM7-214ENST00000505746 HIST1H2ADP20671 130 aa11.42□□□□□ -0.58
PDLIM7-214ENST00000505746 CSNK1G2P78368 415 aa11.42□□□□□ -0.58
PDLIM7-214ENST00000505746 MAT1AQ00266 395 aaKnown RBP11.42□□□□□ -0.58
PDLIM7-214ENST00000505746 CRYMQ14894 314 aa11.42□□□□□ -0.58
PDLIM7-214ENST00000505746 PCOLCEQ15113 449 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms