RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SLC24A5Q71RS6 500 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 ABI3BPQ7Z7G0 1075 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 IQUBQ8NA54 791 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 AQP11Q8NBQ7 271 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 NSMAFQ92636 917 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 NYXQ9GZU5 481 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 UPF3AQ9H1J1 476 aaKnown RBP3.27□□□□□ -1.89
CHD1-203ENST00000505657 ACTL8Q9H568 366 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.27□□□□□ -1.89
CHD1-203ENST00000505657 CSNK1G3Q9Y6M4 447 aa3.27□□□□□ -1.89
CHD1-203ENST00000505657 PCNX3Q9H6A9 2034 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.26□□□□□ -1.89
CHD1-203ENST00000505657 FAM86B1E9PN63 330 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 H0YAE9 185 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 H7C0S8 307 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 PI15O43692 258 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 KRT33AO76009 404 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 APOA4P06727 396 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 FAM86B2P0C5J1 330 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 STAG3L1P0CL83 205 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 CD59P13987 128 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 PRKACGP22612 351 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 HSD17B3P37058 310 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 CRKLP46109 303 aaKnown RBP3.26□□□□□ -1.89
CHD1-203ENST00000505657 TAF6P49848 677 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 OR1D5P58170 312 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 CALCOCO2Q13137 446 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 SNAI3Q3KNW1 292 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 KRT71Q3SY84 523 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 C2CD6Q53TS8 623 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 C6orf136Q5SQH8 315 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 WLSQ5T9L3 541 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 CES4AQ5XG92 561 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 CYB5D1Q6P9G0 228 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 TRAT1Q6PIZ9 186 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 ENPP7Q6UWV6 458 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 STXBP4Q6ZWJ1 553 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 ERN2Q76MJ5 926 aaKnown RBP3.26□□□□□ -1.89
CHD1-203ENST00000505657 CPEB2Q7Z5Q1 589 aaKnown RBP3.26□□□□□ -1.89
CHD1-203ENST00000505657 PIGWQ7Z7B1 504 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 SLFN11Q7Z7L1 901 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 LRRTM1Q86UE6 522 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 GTSCR1Q86UQ5 136 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 RCOR2Q8IZ40 523 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 NME8Q8N427 588 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 OCC1Q8TAD7 63 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 METTL21AQ8WXB1 218 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 SEPT1Q8WYJ6 367 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 P2RX5Q93086 422 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 OMA1Q96E52 524 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 AGAP3Q96P47 875 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 CDCA3Q99618 268 aaPredicted RBP3.26□□□□□ -1.89
CHD1-203ENST00000505657 BAG1Q99933 345 aaPredicted RBP3.26□□□□□ -1.89
CHD1-203ENST00000505657 RIMS4Q9H426 269 aaPredicted RBP3.26□□□□□ -1.89
CHD1-203ENST00000505657 RAB9BQ9NP90 201 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 NUDT4Q9NZJ9 180 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 THEGQ9P2T0 379 aa3.26□□□□□ -1.89
CHD1-203ENST00000505657 CFDP1Q9UEE9 299 aaPredicted RBP3.26□□□□□ -1.89
CHD1-203ENST00000505657 IGSF1Q8N6C5 1336 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 MPTX1A8MV57 137 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 E9PQ18 207 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 F8VVB4 439 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 F8VWA3 439 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 G3V2L1 256 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 RTCAO00442 366 aaKnown RBP3.25□□□□□ -1.89
CHD1-203ENST00000505657 SOCS3O14543 225 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 FDPSP14324 419 aaKnown RBP3.25□□□□□ -1.89
CHD1-203ENST00000505657 LBPP18428 481 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 UGT1A4P22310 534 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 ELAVL4P26378 380 aaKnown RBP3.25□□□□□ -1.89
CHD1-203ENST00000505657 HLA-FP30511 346 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 RGS7P49802 495 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 DCDC1P59894 354 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 PTENP60484 403 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 IRX4P78413 519 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 CACNG1Q06432 222 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 SRSF9Q13242 221 aaKnown RBP eCLIP3.25□□□□□ -1.89
CHD1-203ENST00000505657 NFATC2Q13469 925 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 TAB1Q15750 504 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 FAM166AQ6J272 317 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 MOXD1Q6UVY6 613 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 BTNL8Q6UX41 500 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 KIF6Q6ZMV9 814 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 NRARPQ7Z6K4 114 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 PRSS33Q8NF86 280 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 SNRNP27Q8WVK2 155 aaKnown RBP3.25□□□□□ -1.89
CHD1-203ENST00000505657 ST6GALNAC6Q969X2 333 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 CNRIP1Q96F85 164 aaPredicted RBP3.25□□□□□ -1.89
CHD1-203ENST00000505657 SIPA1Q96FS4 1042 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 RBM41Q96IZ5 413 aaKnown RBP3.25□□□□□ -1.89
CHD1-203ENST00000505657 PRICKLE1Q96MT3 831 aaPredicted RBP3.25□□□□□ -1.89
CHD1-203ENST00000505657 NEDD4LQ96PU5 975 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 EGFL8Q99944 293 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 RBM4BQ9BQ04 359 aaKnown RBP3.25□□□□□ -1.89
CHD1-203ENST00000505657 MGME1Q9BQP7 344 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 AP1M1Q9BXS5 423 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 TDRD1Q9BXT4 1180 aaKnown RBP3.25□□□□□ -1.89
CHD1-203ENST00000505657 DNAI2Q9GZS0 605 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 WWTR1Q9GZV5 400 aa3.25□□□□□ -1.89
CHD1-203ENST00000505657 SDCBP2Q9H190 292 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms