RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ANKRD33Q7Z3H0 272 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 FJX1Q86VR8 437 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 MMD2Q8IY49 270 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 CRYBG2Q8N1P7 616 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 THEM5Q8N1Q8 247 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 FBXW8Q8N3Y1 598 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 PGBD5Q8N414 524 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 KCNH5Q8NCM2 988 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF548Q8NEK5 533 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 IPMKQ8NFU5 416 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 SLC20A1Q8WUM9 679 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 GGHQ92820 318 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 TSACCQ96A04 125 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 FAM46BQ96A09 425 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 ULK4Q96C45 1275 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 RBM18Q96H35 190 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 TMEM19Q96HH6 336 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 SPAG8Q99932 426 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF577Q9BSK1 485 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 TRAF4Q9BUZ4 470 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 SF3B5Q9BWJ5 86 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 MTMR12Q9C0I1 747 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 NT5C3AQ9H0P0 336 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 EBF3Q9H4W6 596 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 RPF1Q9H9Y2 349 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 KCNMB3Q9NPA1 279 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 MRPL17Q9NRX2 175 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 AATFQ9NY61 560 aaKnown RBP eCLIP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 DONSONQ9NYP3 566 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 MIS18AQ9NYP9 233 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 ANKMY1Q9P2S6 941 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 DAPK2Q9UIK4 370 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 VDAC3Q9Y277 283 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 OR2W1Q9Y3N9 320 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 SLC28A1O00337 649 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 O00370 1275 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 LDB3O75112 727 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 KDM4BO94953 1096 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 PTBP3O95758 552 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 BAG3O95817 575 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 GLUD1P00367 558 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 SKILP12757 684 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 TNFRSF1BP20333 461 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 ARRB2P32121 409 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 SFTPDP35247 375 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 MDH1P40925 334 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 NSFP46459 744 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 GLUD2P49448 558 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 CNN1P51911 297 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 SSTP61278 116 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 SLC3A1Q07837 685 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 DMPKQ09013 629 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 Q0VFX4 171 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 ODF3L2Q3SX64 289 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF770Q6IQ21 691 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF425Q6IV72 752 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 IRGCQ6NXR0 463 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 COLCA1Q6ZS62 124 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 KMT5CQ86Y97 462 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 TMEM139Q8IV31 216 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 PRSS35Q8N3Z0 413 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 RBMXL3Q8N7X1 1067 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 PRR26Q8N8Z3 221 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 U2AF1L4Q8WU68 220 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 ZNF606Q8WXB4 792 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 PIGBQ92521 554 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 SCMH1Q96GD3 660 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 FAM20AQ96MK3 541 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 THUMPD2Q9BTF0 503 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 TEX13BQ9BXU2 312 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 RIMS4Q9H426 269 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 RIBC2Q9H4K1 309 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 FKRPQ9H9S5 495 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 UBTD1Q9HAC8 227 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 RAB9BQ9NP90 201 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 HOMER3Q9NSC5 361 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 PIGVQ9NUD9 493 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 EXTL2Q9UBQ6 330 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 NUDCQ9Y266 331 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 DLGAP4Q9Y2H0 992 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 INSL5Q9Y5Q6 135 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 U3KQV3 271 aa3.61□□□□□ -1.83
TRAPPC13-208ENST00000505553 IGLV5-52A0A0A0MRZ9 124 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 ANKDD1BA6NHY2 528 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 C17orf105B2RV13 164 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 M0R296 226 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 ANGPT2O15123 496 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 CLDN3O15551 220 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 GRAP2O75791 330 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 OR6A2O95222 327 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 DIRAS3O95661 229 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 TPM2P07951 284 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 HOXC6P09630 235 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 LINC00271P0C7V0 271 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 MARCKSP29966 332 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 CETN2P41208 172 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 OR3A3P47888 321 aa3.6□□□□□ -1.83
TRAPPC13-208ENST00000505553 SLC6A12P48065 614 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms