RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 KCNJ14Q9UNX9 436 aa2.93□□□□□ -1.94
RFC1-209ENST00000504974 TNNQ9UQP3 1299 aa2.93□□□□□ -1.94
RFC1-209ENST00000504974 LIPGQ9Y5X9 500 aa2.93□□□□□ -1.94
RFC1-209ENST00000504974 COL24A1Q17RW2 1714 aa2.93□□□□□ -1.94
RFC1-209ENST00000504974 QSER1Q2KHR3 1735 aa2.93□□□□□ -1.94
RFC1-209ENST00000504974 PAPPAQ13219 1627 aa2.93□□□□□ -1.94
RFC1-209ENST00000504974 TRIP12Q14669 1992 aaPredicted RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 CNTNAP1P78357 1384 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 NPC1L1Q9UHC9 1359 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 ITGB4P16144 1822 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 TUBGCP6Q96RT7 1819 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 ENO4A6NNW6 628 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 ERVV-2B6SEH9 535 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 PTGESO14684 152 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 SLC22A2O15244 555 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 ATP6V0E1O15342 81 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 LINC01565O15544 149 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 TRMUO75648 421 aaKnown RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 IGKV3-20P01619 116 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 QDPRP09417 244 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 IRF2P14316 349 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 MYL6BP14649 208 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 DARSP14868 501 aaKnown RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 EFNA1P20827 205 aaPredicted RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 PTGER4P35408 488 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 CRKLP46109 303 aaKnown RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 CAPZA1P52907 286 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 B3GALT5-AS1P59052 145 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 KCNJ10P78508 379 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 TAF10Q12962 218 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 GPR17Q13304 367 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 PPIGQ13427 754 aaKnown RBP eCLIP2.92□□□□□ -1.94
RFC1-209ENST00000504974 ITGA7Q13683 1181 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 UGT3A2Q3SY77 523 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 SPDYCQ5MJ68 293 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 CYP4A22Q5TCH4 519 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 CAVIN1Q6NZI2 390 aaKnown RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 IL27RAQ6UWB1 636 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 C15orf39Q6ZRI6 1047 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 MFSD6Q6ZSS7 791 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 Q6ZTC4 211 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 C11orf57Q6ZUT1 292 aaPredicted RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 SPATA21Q7Z572 469 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 TICAM2Q86XR7 235 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 FAM219AQ8IW50 185 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 MAPKAPK5-AS1Q8N8E1 139 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 OR4K1Q8NGD4 311 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 VANGL1Q8TAA9 524 aaPredicted RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 PHLDA1Q8WV24 401 aaPredicted RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 PROX1Q92786 737 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 FBXO17Q96EF6 278 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 RMDN2Q96LZ7 410 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 FAM20AQ96MK3 541 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 SPAG5Q96R06 1193 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 CCDC3Q9BQI4 270 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 MGME1Q9BQP7 344 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 FSD1Q9BTV5 496 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 SLC2A11Q9BYW1 496 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 FN3KQ9H479 309 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 PANK3Q9H999 370 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 SDR39U1Q9NRG7 319 aaPredicted RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 FAM207AQ9NSI2 230 aaPredicted RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 CHCHD3Q9NX63 227 aaKnown RBP2.92□□□□□ -1.94
RFC1-209ENST00000504974 P4HTMQ9NXG6 502 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 TXNDC16Q9P2K2 825 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 STUB1Q9UNE7 303 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 WDR83OSQ9Y284 106 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 C2CD2Q9Y426 696 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 KNSTRNQ9Y448 316 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 POMT1Q9Y6A1 747 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 TOGARAM1Q9Y4F4 1720 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 SBF1O95248 1867 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 CCDC88AQ3V6T2 1871 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 PCDH11XQ9BZA7 1347 aa2.92□□□□□ -1.94
RFC1-209ENST00000504974 VIRMAQ69YN4 1812 aaKnown RBP2.91□□□□□ -1.94
RFC1-209ENST00000504974 LY75O60449 1722 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 A0A087WYN8 130 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 TRAV34A0A0B4J273 112 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 A0A1W2PN81 502 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 BLOC1S5-TXNDC5H3BN57 136 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 ARPC2O15144 300 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 RPS6KA5O75582 802 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 DDHD2O94830 711 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 GSRP00390 522 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 HMBSP08397 361 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 CD48P09326 243 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 SAGP10523 405 aaPredicted RBP2.91□□□□□ -1.94
RFC1-209ENST00000504974 ACAT1P24752 427 aaKnown RBP2.91□□□□□ -1.94
RFC1-209ENST00000504974 ITGA3P26006 1051 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 CHRNB4P30926 498 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 CSTF2P33240 577 aaKnown RBP eCLIP2.91□□□□□ -1.94
RFC1-209ENST00000504974 TIMP3P35625 211 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 CHRNA7P36544 502 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 GP5P40197 560 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 TFCP2Q12800 502 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 ZNF273Q14593 569 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 NONOQ15233 471 aaKnown RBP eCLIP2.91□□□□□ -1.94
RFC1-209ENST00000504974 PHKG1Q16816 387 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 KIAA1644Q3SXP7 199 aa2.91□□□□□ -1.94
RFC1-209ENST00000504974 LRRC73Q5JTD7 316 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms