RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 PARP6Q2NL67 630 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 FASTKD1Q53R41 847 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 KCTD11Q693B1 232 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 TMEM205Q6UW68 189 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 CPEB2Q7Z5Q1 589 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 FGD2Q7Z6J4 655 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 CD163Q86VB7 1156 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 PLD3Q8IV08 490 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 SIAH3Q8IW03 269 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 SHISA5Q8N114 240 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 EID3Q8N140 333 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 CPSF7Q8N684 471 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 OTUD6BQ8N6M0 293 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 OR13J1Q8NGT2 312 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 OR9A4Q8NGU2 314 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 FAM136AQ96C01 138 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 SCMH1Q96GD3 660 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 FOPNLQ96NB1 174 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 DMRTA2Q96SC8 542 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 DNAJC7Q99615 494 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 VKORC1Q9BQB6 163 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 OSBPL8Q9BZF1 889 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 UCK2Q9BZX2 261 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 VN1R1Q9GZP7 353 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 GSX1Q9H4S2 264 aaPredicted RBP6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 ENAMQ9NRM1 1142 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 LRFN1Q9P244 771 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 TNFRSF10DQ9UBN6 386 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 C19orf25Q9UFG5 118 aaPredicted RBP6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 TAC3Q9UHF0 121 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 GNPTGQ9UJJ9 305 aa6.51□□□□□ -1.37
NPIPB3-203ENST00000504841 A0A1B0GTH9 108 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PRMT5O14744 637 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 TFECO14948 347 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 SLC25A12O75746 678 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 CDC123O75794 336 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 SUN1O94901 812 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 TPM3P06753 285 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 SP1P08047 785 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 IL1RNP18510 177 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 KLK2P20151 261 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 AOAHP28039 575 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PTGS2P35354 604 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PPARGP37231 505 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 XCR1P46094 333 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 AVPR1BP47901 424 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 GDF10P55107 478 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 EIF3BP55884 814 aaKnown RBP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 TAS2R50P59544 299 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 TRIM14Q14142 442 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 CEBPEQ15744 281 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 NDUFA9Q16795 377 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 P3H1Q32P28 736 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 RNFT1Q5M7Z0 435 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 TSTD2Q5T7W7 516 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PLAG1Q6DJT9 500 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 SLC25A25Q6KCM7 469 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 C11orf63Q6NUN7 778 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 FBXO42Q6P3S6 717 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PAPD4Q6PIY7 484 aaKnown RBP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PPP1R21Q6ZMI0 780 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 ZNF534Q76KX8 674 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 OTOAQ7RTW8 1153 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PRSS41Q7RTY9 318 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 ANKRD37Q7Z713 158 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PAQR7Q86WK9 346 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 CCDC71Q8IV32 467 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 CHERPQ8IWX8 916 aaKnown RBP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 KLHDC8BQ8IXV7 354 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 MARVELD2Q8N4S9 558 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 SLC5A8Q8N695 610 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 ACBD4Q8NC06 268 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PPFIBP2Q8ND30 876 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 OR4L1Q8NH43 312 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 HMGCLL1Q8TB92 370 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 ZCCHC10Q8TBK6 192 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 ZNF778Q96MU6 729 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PANX3Q96QZ0 392 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 NPAS2Q99743 824 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 PLCD4Q9BRC7 762 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 CARD6Q9BX69 1037 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 TGIF2Q9GZN2 237 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 CATSPERZQ9NTU4 200 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 CCM2LQ9NUG4 571 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 SPATA7Q9P0W8 599 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 MARCH4Q9P2E8 410 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 ANAPC5Q9UJX4 755 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 INTUQ9ULD6 942 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 RNF6Q9Y252 685 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 ASB1Q9Y576 335 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 KLK4Q9Y5K2 254 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 MRFAP1Q9Y605 127 aa6.5□□□□□ -1.37
NPIPB3-203ENST00000504841 IGKV1-8A0A0C4DH67 115 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 ZNF860A6NHJ4 632 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 SOWAHDA6NJG2 315 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 TMEM200CA6NKL6 621 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 ARHGEF33A8MVX0 844 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 FOXO6A8MYZ6 492 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 E7EVH7 732 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms