RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 LIPMQ5VYY2 423 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 CAPN13Q6MZZ7 669 aaPredicted RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 IRGCQ6NXR0 463 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 GTF2H2CQ6P1K8 395 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 KLC3Q6P597 504 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 KLHL35Q6PF15 583 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 FIGLAQ6QHK4 219 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 NXPE4Q6UWF7 544 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 ZCCHC23Q6ZST2 131 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 FRA10AC1Q70Z53 315 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 DGLUCYQ7Z3D6 616 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 PLD3Q8IV08 490 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 TMEM151BQ8IW70 566 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 DTWD1Q8N5C7 304 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 C19orf47Q8N9M1 422 aaKnown RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 AGAP11Q8TF27 550 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 USP7Q93009 1102 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 EXT2Q93063 718 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 ZDHHC12Q96GR4 267 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 SMIM10Q96HG1 83 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 TSNARE1Q96NA8 513 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 CDK15Q96Q40 435 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF382Q96SR6 550 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 EGFL8Q99944 293 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 TRIM54Q9BYV2 358 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 DRC3Q9H069 523 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 KLHL25Q9H0H3 589 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 PCBD2Q9H0N5 130 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 RHBGQ9H310 441 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 TUBB1Q9H4B7 451 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 IPPKQ9H8X2 491 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 MLXIPLQ9NP71 852 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 LHX9Q9NQ69 397 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 FBXO8Q9NRD0 319 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 TMEM184CQ9NVA4 438 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 DNAJC11Q9NVH1 559 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 CD274Q9NZQ7 290 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 ANKMY1Q9P2S6 941 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 KLK13Q9UKR3 277 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 ACSL6Q9UKU0 697 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 TMCO1Q9UM00 188 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 APOBEC2Q9Y235 224 aaKnown RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 RNF11Q9Y3C5 154 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 TMEM184BQ9Y519 407 aaPredicted RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 PCDHGA8Q9Y5G5 932 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 PCDHGA3Q9Y5H0 932 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 TNPO3Q9Y5L0 923 aaKnown RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 FEZF1A0PJY2 475 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SERTM1A2A2V5 107 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 GSAPA4D1B5 854 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF839A8K0R7 811 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 B4E171 279 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 NPIPB8E9PQR5 432 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 H0YIV9 168 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF195O14628 629 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TERTO14746 1132 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 KLF11O14901 512 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 KDM1AO60341 852 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ETHE1O95571 254 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ONECUT2O95948 504 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 JUNP05412 331 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 CAPN1P07384 714 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 FGF4P08620 206 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 C1GALT1C1LP0DN25 315 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 MYL2P10916 166 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 FGF5P12034 268 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 GFAPP14136 432 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 EZRP15311 586 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 EPB42P16452 691 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF28P17035 718 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TSPAN8P19075 237 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 RORAP35398 523 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TSPAN7P41732 249 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ID4P47928 161 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 HTR6P50406 440 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 EFNA3P52797 238 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 INHBCP55103 352 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 PPP2R2AP63151 447 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SHC2P98077 582 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 OCRLQ01968 901 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 KRT33BQ14525 404 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 GPR19Q15760 415 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TCHHL1Q5QJ38 904 aaPredicted RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 PRAMEF17Q5VTA0 474 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 RGS9BPQ6ZS82 235 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 RNF165Q6ZSG1 346 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SYVN1Q86TM6 617 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 DTX1Q86Y01 620 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 SLC22A9Q8IVM8 553 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 RNF175Q8N4F7 328 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 AFAP1L2Q8N4X5 818 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TEX9Q8N6V9 391 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 OR7G3Q8NG95 312 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 OR4F6Q8NGB9 312 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 OR1L3Q8NH93 324 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF473Q8WTR7 871 aaKnown RBP4.72□□□□□ -1.65
LMNB1-208ENST00000504788 GRAMD1AQ96CP6 724 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 CCDC126Q96EE4 140 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 MED8Q96G25 268 aa4.72□□□□□ -1.65
LMNB1-208ENST00000504788 TCTN2Q96GX1 697 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms