RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 MYOCOSA0A1B0GUC4 107 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 E7EQ34 232 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 M0QX08 132 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 CLDN4O14493 209 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 GTF2E2P29084 291 aaKnown RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 KCNC1P48547 511 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 MTAPQ13126 283 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 TNFAIP8L3Q5GJ75 292 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 NAIF1Q69YI7 327 aaPredicted RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 RPLP0P6Q8NHW5 317 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 DOK4Q8TEW6 326 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 MZB1Q8WU39 189 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 NCSTNQ92542 709 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 L3HYPDHQ96EM0 354 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 CHFRQ96EP1 664 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 WDR92Q96MX6 357 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 NECTIN4Q96NY8 510 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 ATOH8Q96SQ7 321 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 PKMYT1Q99640 499 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 MUC13Q9H3R2 512 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 CLK4Q9HAZ1 481 aaKnown RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 TRPS1Q9UHF7 1281 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 UTS2RQ9UKP6 389 aa13.64□□□□□ -0.23
TCOF1-207ENST00000504761 INTS6Q9UL03 887 aaKnown RBP13.64□□□□□ -0.23
TCOF1-207ENST00000504761 FER1L6Q2WGJ9 1857 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 MMP2P08253 660 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 MPC1LP0DKB6 136 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 RPL5P46777 297 aaKnown RBP13.63□□□□□ -0.23
TCOF1-207ENST00000504761 NDUFA9Q16795 377 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 TOR1AIP1Q5JTV8 583 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 HUS1BQ8NHY5 278 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 LKAAEAR1Q8TD35 194 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 RAB8BQ92930 207 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 PAPOLBQ9NRJ5 636 aaKnown RBP13.63□□□□□ -0.23
TCOF1-207ENST00000504761 AIG1Q9NVV5 245 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 COL11A1P12107 1806 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-207ENST00000504761 BCL10O95999 233 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 RAP2AP10114 183 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 LAMP2P13473 410 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 RNF220Q5VTB9 566 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 GPR107Q5VW38 600 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 PLEKHM3Q6ZWE6 761 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 ZNF689Q96CS4 500 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-207ENST00000504761 PKP4Q99569 1192 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 DPH7Q9BTV6 452 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 SLC12A9Q9BXP2 914 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 IL21Q9HBE4 155 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 AMBNQ9NP70 447 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 TBC1D23Q9NUY8 699 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 ATXN10Q9UBB4 475 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 N6AMT1Q9Y5N5 214 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 AQP12BA6NM10 295 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 MYL12AP19105 171 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 CSNK2A2P19784 350 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-207ENST00000504761 ITGB7P26010 798 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 RHDQ02161 417 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 CATSPEREQ5SY80 951 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 ARMC3Q5W041 872 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 BHLHA9Q7RTU4 235 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 HIPK1Q86Z02 1210 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 AQP12AQ8IXF9 295 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 FAM81AQ8TBF8 368 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 FAM3CQ92520 227 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 CDCA3Q99618 268 aaPredicted RBP13.63□□□□□ -0.23
TCOF1-207ENST00000504761 RBCK1Q9BYM8 510 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 SNX7Q9UNH6 387 aa13.63□□□□□ -0.23
TCOF1-207ENST00000504761 A8MUA0 341 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 C1SP09871 688 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 RPL4P36578 427 aaKnown RBP13.62□□□□□ -0.23
TCOF1-207ENST00000504761 ACADVLP49748 655 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 ST13P50502 369 aaKnown RBP13.62□□□□□ -0.23
TCOF1-207ENST00000504761 DUOXA1Q1HG43 343 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 CYP27C1Q4G0S4 372 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 RBM44Q6ZP01 1051 aaKnown RBP13.62□□□□□ -0.23
TCOF1-207ENST00000504761 PRR23BQ6ZRT6 265 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 LIMS2Q7Z4I7 341 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 FAM20CQ8IXL6 584 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 SLC22A15Q8IZD6 547 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 SVOPQ8N4V2 548 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 TTC29Q8NA56 475 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-207ENST00000504761 BIRC7Q96CA5 298 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 ADI1Q9BV57 179 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 IL21RQ9HBE5 538 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 STOX2Q9P2F5 926 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-207ENST00000504761 CA5BQ9Y2D0 317 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 TMED5Q9Y3A6 229 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 MYL12BO14950 172 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 BMP7P18075 431 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 SMIM11AP58511 58 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 XIAPP98170 497 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 TRAP1Q12931 704 aaKnown RBP13.62□□□□□ -0.23
TCOF1-207ENST00000504761 TYSND1Q2T9J0 566 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 PDCD4Q53EL6 469 aaKnown RBP13.62□□□□□ -0.23
TCOF1-207ENST00000504761 BROXQ5VW32 411 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.62□□□□□ -0.23
TCOF1-207ENST00000504761 SLC15A3Q8IY34 581 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 CADM2Q8N3J6 435 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 GPR151Q8TDV0 419 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 ARHGEF33A8MVX0 844 aa13.62□□□□□ -0.23
TCOF1-207ENST00000504761 BCAS2O75934 225 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms