RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 TRPC4APQ8TEL6 797 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 PPP4R1Q8TF05 950 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 ZNF501Q96CX3 271 aaPredicted RBP12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 CDK15Q96Q40 435 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 PAIP2Q9BPZ3 127 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 MACROD1Q9BQ69 325 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 ERVK-6Q9BXR3 956 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 IPPKQ9H8X2 491 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 PELI2Q9HAT8 420 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 OXSMQ9NWU1 459 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 KLK4Q9Y5K2 254 aa12.71□□□□□ -0.37
PDLIM7-212ENST00000504380 ZZEF1O43149 2961 aa12.71□□□□□ -0.38
PDLIM7-212ENST00000504380 H0YGG7 62 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 MAP3K7O43318 606 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 OR1F1O43749 312 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 EIF2S1P05198 315 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 GNAZP19086 355 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 ARL1P40616 181 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 PIK3CGP48736 1102 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 WDR4P57081 412 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 ARF3P61204 181 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 REEP5Q00765 189 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 IRF8Q02556 426 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 CLCQ05315 142 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 RBBP5Q15291 538 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 RBBP7Q16576 425 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 ATG9BQ674R7 924 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 ADNP2Q6IQ32 1131 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 RNF44Q7L0R7 432 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 MYLK4Q86YV6 388 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 KDF1Q8NAX2 398 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 OR4K1Q8NGD4 311 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 OR52B6Q8NGF0 335 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 MDM1Q8TC05 714 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 N4BP2L2Q92802 583 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 ATP6V1E2Q96A05 226 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 GRAMD1AQ96CP6 724 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 L3HYPDHQ96EM0 354 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 ZFYVE21Q9BQ24 234 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 GATA5Q9BWX5 397 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 SHCBP1LQ9BZQ2 653 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 ACBD3Q9H3P7 528 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 GSTO2Q9H4Y5 243 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 POLR1BQ9H9Y6 1135 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 IRAK4Q9NWZ3 460 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 GEMIN8Q9NWZ8 242 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 GPRC5BQ9NZH0 403 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 ANKMY1Q9P2S6 941 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 PLCL2Q9UPR0 1127 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 RNF11Q9Y3C5 154 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 B3GALT1Q9Y5Z6 326 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 AK5Q9Y6K8 562 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 ASPMQ8IZT6 3477 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 SPTBP11277 2137 aa12.7□□□□□ -0.38
PDLIM7-212ENST00000504380 MDC1Q14676 2089 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 B4E171 279 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 C9orf172C9J069 976 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 DYNC1I1O14576 645 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 POLR1CO15160 346 aaPredicted RBP12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 TM9SF1O15321 606 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 P2RX6O15547 441 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 TRIM13O60858 407 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 H2AFYO75367 372 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 ZWINTO95229 277 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 BPGMP07738 259 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 ZNF28P17035 718 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 HRH2P25021 359 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 TSPAN7P41732 249 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 SERPINB4P48594 390 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 DNAJB13P59910 316 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 SNRPNP63162 240 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 CYP4F2P78329 520 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 ACY1Q03154 408 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 ZC3H12BQ5HYM0 836 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 WASHC2DQ5SRD0 308 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 HHATQ5VTY9 493 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 LIPMQ5VYY2 423 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 CES4AQ5XG92 561 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 PWWP2BQ6NUJ5 590 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 CCDC126Q96EE4 140 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 OR2A5Q96R48 311 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 AIF1LQ9BQI0 150 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 C1QTNF3Q9BXJ4 246 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 CAPS2Q9BXY5 557 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 FBXO8Q9NRD0 319 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 FOXJ2Q9P0K8 574 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 MID2Q9UJV3 735 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 RARRES3Q9UL19 164 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 ZNF490Q9ULM2 529 aaPredicted RBP12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 NEUROG3Q9Y4Z2 214 aa12.69□□□□□ -0.38
PDLIM7-212ENST00000504380 ZFYVE26Q68DK2 2539 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 TRBC2A0A5B9 178 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 HMGB1P1B2RPK0 211 aaPredicted RBP12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 H3BMH7 237 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 UBFD1O14562 309 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 BRINP1O60477 761 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 WFS1O76024 890 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 OR4F21O95013 312 aa12.68□□□□□ -0.38
PDLIM7-212ENST00000504380 MED26O95402 600 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms