RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 KCT2Q8NC54 265 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 SMG8Q8ND04 991 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 OR56A1Q8NGH5 318 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TAMM41Q96BW9 452 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 ZFP3Q96NJ6 502 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 DGAT2Q96PD7 388 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 PKP4Q99569 1192 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 RGS17Q9UGC6 210 aaPredicted RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 A0A075B6Q4 140 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 KMOO15229 486 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 CPNE3O75131 537 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 ITGA10O75578 1167 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TXNL4AP83876 142 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 IGDCC3Q8IVU1 814 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 SLITRK4Q8IW52 837 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 NPAS3Q8IXF0 933 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 NSUN3Q9H649 340 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 TMLHEQ9NVH6 421 aa16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 NKX1-2Q9UD57 310 aaPredicted RBP16.07■□□□□ 0.16
PCDHA1-203ENST00000504120 PRSS51A0A1B0GVH4 220 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 M0QX08 132 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 GNB5O14775 395 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TYROBPO43914 113 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 BTN3A2P78410 334 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 ZNF776Q68DI1 518 aaPredicted RBP16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TSTD1Q8NFU3 115 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 OR9I1Q8NGQ6 314 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 NFKBIDQ8NI38 313 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TSPEARQ8WU66 669 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 NR4A3Q92570 626 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 PEX13Q92968 403 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 LRCH3Q96II8 777 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 IL4I1Q96RQ9 567 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 DPYSL5Q9BPU6 564 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TTYH1Q9H313 450 aaPredicted RBP16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 MARCH7Q9H992 704 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 MARK1Q9P0L2 795 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 ERVK-11Q9UQG0 969 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TELO2Q9Y4R8 837 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 FAM189A1O60320 539 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 LINGO3P0C6S8 592 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TYRP14679 529 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 RFC2P35250 354 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 CLEC12AQ5QGZ9 265 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 GPRC6AQ5T6X5 926 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TCEAL6Q6IPX3 200 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 CEACAM20Q6UY09 585 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 DLK2Q6UY11 383 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 ZNF783Q6ZMS7 281 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 RASSF6Q6ZTQ3 369 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 NCSTNQ92542 709 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 XYLT2Q9H1B5 865 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TBC1D24Q9ULP9 559 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 RNF11Q9Y3C5 154 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 LRRC42Q9Y546 428 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 CXCR1P25024 350 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 VLDLRP98155 873 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 BPIFB1Q8TDL5 484 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 ZUFSPQ96AP4 578 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 MND1Q9BWT6 205 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TNFRSF10DQ9UBN6 386 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 PTBP2Q9UKA9 531 aaKnown RBP16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 A0A0J9YVX5 310 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 ST3GAL3Q11203 375 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 SPANXN4Q5MJ08 99 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TAS1R3Q7RTX0 852 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 GALNTL5Q7Z4T8 443 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 TMEM126BQ8IUX1 230 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 OR8H1Q8NGG4 311 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 AURKBQ96GD4 344 aaPredicted RBP16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 SERINC1Q9NRX5 453 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 PCDHB11Q9Y5F2 797 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 PSAT1Q9Y617 370 aa16.06■□□□□ 0.16
PCDHA1-203ENST00000504120 MMP20O60882 483 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 SOCS5O75159 536 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 SOD2P04179 222 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 GNSP15586 552 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 ENPP2Q13822 863 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 TOR1AIP1Q5JTV8 583 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 PLEKHS1Q5SXH7 462 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 KLHDC10Q6PID8 442 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 HSH2DQ96JZ2 352 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 TBX5Q99593 518 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 SLC22A4Q9H015 551 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 RC3H2Q9HBD1 1191 aaKnown RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 PMF1-BGLAPU3KQ54 211 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 FESP07332 822 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 HOXC12P31275 282 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 SCRN3Q0VDG4 424 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 DCUN1D3Q8IWE4 304 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 MAGEE1Q9HCI5 957 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 RFPL1O75677 317 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 FGF3P11487 239 aaPredicted RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 CCND3P30281 292 aaPredicted RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 MLLT3P42568 568 aaPredicted RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 CTSOP43234 321 aaPredicted RBP16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 CBLBQ13191 982 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 UBXN2BQ14CS0 331 aa16.05■□□□□ 0.16
PCDHA1-203ENST00000504120 SYT16Q17RD7 645 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms