RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 OR1I1O60431 355 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 STK10O94804 968 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 TPH1P17752 444 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 AVPR1BP47901 424 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 PMPCAQ10713 525 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 POU6F1Q14863 301 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 CLEC9AQ6UXN8 241 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 CCDC50Q8IVM0 306 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 RHOT2Q8IXI1 618 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 ZZZ3Q8IYH5 903 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 LGI4Q8N135 537 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 ACRBPQ8NEB7 543 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 GOT1L1Q8NHS2 421 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 GSDMBQ8TAX9 411 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 RERGQ96A58 199 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 MBD6Q96DN6 1003 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 GPATCH1Q9BRR8 931 aaKnown RBP14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 L3MBTL1Q9Y468 752 aa14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.9□□□□□ -0.026e-7■□□□□ 9.2
PDLIM7-210ENST00000503827 NSD1Q96L73 2696 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-210ENST00000503827 hCG_1818297A0A087WSY0 165 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 A0A1W2PPV9 198 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 KIAA1324LA8MWY0 1029 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 INHBBP09529 407 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 TFEBP19484 476 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 FOXN2P32314 431 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 NUP107P57740 925 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 YBX1P67809 324 aaKnown RBP14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 FAM53BQ14153 422 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 TMED2Q15363 201 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 NDUFA9Q16795 377 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 ANKRD37Q7Z713 158 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 PRIMA1Q86XR5 153 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 NUDT8Q8WV74 236 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 TMEM125Q96AQ2 219 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 IQCDQ96DY2 449 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 PLCD4Q9BRC7 762 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 ACAT2Q9BWD1 397 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 CARD6Q9BX69 1037 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 CDCP1Q9H5V8 836 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 RASSF1Q9NS23 344 aa14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 TTC7AQ9ULT0 858 aaPredicted RBP14.89□□□□□ -0.03
PDLIM7-210ENST00000503827 H0YIG0 161 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 APOC4-APOC2K7ER74 178 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 NDC80O14777 642 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 PSTPIP1O43586 416 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 C1orf105O95561 183 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 APOC2P02655 101 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 PKMP14618 531 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 COMTP21964 271 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 BDKRB1P46663 353 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 CYB561P49447 251 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 ACTN3Q08043 901 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 PTK6Q13882 451 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 ARHGAP11AQ6P4F7 1023 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 PAPD4Q6PIY7 484 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 RPS19BP1Q86WX3 136 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 RPRMLQ8N4K4 120 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 ARHGEF39Q8N4T4 335 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 WFDC11Q8NEX6 87 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 OR5M3Q8NGP4 307 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 SKA2Q8WVK7 121 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 ARSGQ96EG1 525 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 LPAR4Q99677 370 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 BPIFA3Q9BQP9 254 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 SLC6A16Q9GZN6 736 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 MRPS30Q9NP92 439 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 LMBRD1Q9NUN5 540 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 UTP6Q9NYH9 597 aaKnown RBP14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 KLF13Q9Y2Y9 288 aaPredicted RBP14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 SCN3AQ9NY46 2000 aa14.88□□□□□ -0.03
PDLIM7-210ENST00000503827 A0A0U1RQJ8 604 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 CCDC162PA2VCL2 907 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 IQCF5A8MTL0 148 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 FAM171A2A8MVW0 826 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 KLRC4-KLRK1H3BQV0 150 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 HS6ST1O60243 411 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 HEXAP06865 529 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 PSMA3P25788 255 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 AOAHP28039 575 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 CCNFP41002 786 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 CCSMST1Q4G0I0 132 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 CCDC181Q5TID7 509 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 ZNF468Q5VIY5 522 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 ARSKQ6UWY0 536 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 BBS12Q6ZW61 710 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 CXXC5Q7LFL8 322 aaKnown RBP14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 PAQR7Q86WK9 346 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 CDKL3Q8IVW4 592 aaPredicted RBP14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 RCOR2Q8IZ40 523 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 LRRN4CLQ8ND94 238 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 OR10Q1Q8NGQ4 319 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 LKAAEAR1Q8TD35 194 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 MAGEC3Q8TD91 643 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 MCOLN3Q8TDD5 553 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 SPATA13Q96N96 652 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 OR2A5Q96R48 311 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 SYNPO2LQ9H987 977 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 SPATA7Q9P0W8 599 aa14.87□□□□□ -0.03
PDLIM7-210ENST00000503827 NFS1Q9Y697 457 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms