RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 SPOCK3Q9BQ16 436 aa12.31□□□□□ -0.44
TRIO-205ENST00000503399 UTP23Q9BRU9 249 aaKnown RBP12.31□□□□□ -0.44
TRIO-205ENST00000503399 P2RY12Q9H244 342 aa12.31□□□□□ -0.44
TRIO-205ENST00000503399 UTP6Q9NYH9 597 aaKnown RBP12.31□□□□□ -0.44
TRIO-205ENST00000503399 C19orf25Q9UFG5 118 aaPredicted RBP12.31□□□□□ -0.44
TRIO-205ENST00000503399 DUSP10Q9Y6W6 482 aa12.31□□□□□ -0.44
TRIO-205ENST00000503399 SCN2AQ99250 2005 aa12.31□□□□□ -0.44
TRIO-205ENST00000503399 ARHGEF33A8MVX0 844 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 TXNDC9O14530 226 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 FANCGO15287 622 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 SUN1O94901 812 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 CCNDBP1O95273 360 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 PKMP14618 531 aaKnown RBP12.3□□□□□ -0.44
TRIO-205ENST00000503399 EZRP15311 586 aaKnown RBP12.3□□□□□ -0.44
TRIO-205ENST00000503399 CD46P15529 392 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 FDFT1P37268 417 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 CD96P40200 585 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 TBX2Q13207 712 aaPredicted RBP12.3□□□□□ -0.44
TRIO-205ENST00000503399 MEP1AQ16819 746 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 ANKRD20A4Q4UJ75 823 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 CTSL3PQ5NE16 218 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 ICE2Q659A1 982 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 PLAG1Q6DJT9 500 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 GALNTL5Q7Z4T8 443 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 CRLF3Q8IUI8 442 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 CCDC170Q8IYT3 715 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 GHDCQ8N2G8 530 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 UBL4BQ8N7F7 174 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 TC2NQ8N9U0 490 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 TMEM178AQ8NBL3 297 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 PPFIBP2Q8ND30 876 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 MDS2Q8NDY4 140 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 SLC35B2Q8TB61 432 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 FRMD6Q96NE9 622 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 OR2A5Q96R48 311 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 CYTH2Q99418 400 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 CHRAC1Q9NRG0 131 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 RAB6BQ9NRW1 208 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 HCN3Q9P1Z3 774 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 PPT2Q9UMR5 302 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 PACSIN2Q9UNF0 486 aaPredicted RBP12.3□□□□□ -0.44
TRIO-205ENST00000503399 PCDHGB6Q9Y5F9 930 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 HEATR5BQ9P2D3 2071 aa12.3□□□□□ -0.44
TRIO-205ENST00000503399 TCRBV7S2A1N4TA0A589 114 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 GRID2IPA4D2P6 1211 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 OR2W5A6NFC9 320 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 GABRR3A8MPY1 467 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 HAT1O14929 419 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 ASNA1O43681 348 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 MAN1A2O60476 641 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 NIPSNAP2O75323 286 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 IPO7O95373 1038 aaKnown RBP12.29□□□□□ -0.44
TRIO-205ENST00000503399 TSPAN12O95859 305 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 APRTP07741 180 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 RPS3P23396 243 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRIO-205ENST00000503399 FMO4P31512 558 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 XCR1P46094 333 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 SESN2P58004 480 aaPredicted RBP12.29□□□□□ -0.44
TRIO-205ENST00000503399 SNRPNP63162 240 aaKnown RBP12.29□□□□□ -0.44
TRIO-205ENST00000503399 CRADDP78560 199 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 KLF1Q13351 362 aaPredicted RBP12.29□□□□□ -0.44
TRIO-205ENST00000503399 THEMIS2Q5TEJ8 643 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 ZNF425Q6IV72 752 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 PRSS41Q7RTY9 318 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 PEX26Q7Z412 305 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.29□□□□□ -0.44
TRIO-205ENST00000503399 ANKRD37Q7Z713 158 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 PRUNE1Q86TP1 453 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 LRRC6Q86X45 466 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 ARHGEF39Q8N4T4 335 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 RNF214Q8ND24 703 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 SCMH1Q96GD3 660 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
TRIO-205ENST00000503399 COQ3Q9NZJ6 369 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 AMFRQ9UKV5 643 aa12.29□□□□□ -0.44
TRIO-205ENST00000503399 ASPDHA6ND91 283 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 SOWAHDA6NJG2 315 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 SMAPO00193 183 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 PRRG2O14669 202 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 MATN4O95460 622 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 NADKO95544 446 aaPredicted RBP12.28□□□□□ -0.44
TRIO-205ENST00000503399 SYF2O95926 243 aaKnown RBP12.28□□□□□ -0.44
TRIO-205ENST00000503399 CATP04040 527 aaKnown RBP12.28□□□□□ -0.44
TRIO-205ENST00000503399 ERGP11308 486 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 CD1EP15812 388 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 ZNF24P17028 368 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 IL1RNP18510 177 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 PNLIPRP1P54315 467 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 PRDX1Q06830 199 aaKnown RBP12.28□□□□□ -0.44
TRIO-205ENST00000503399 FAM53BQ14153 422 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 EXT1Q16394 746 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 MAPKAPK3Q16644 382 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 KRTAP21-3Q3LHN1 58 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 PCID2Q5JVF3 399 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 H3F3CQ6NXT2 135 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 DOLPP1Q86YN1 238 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 SHISA5Q8N114 240 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 EID3Q8N140 333 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 MPP5Q8N3R9 675 aa12.28□□□□□ -0.44
TRIO-205ENST00000503399 SLC5A8Q8N695 610 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms