RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 AOAHP28039 575 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 CCR7P32248 378 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 SLC19A1P41440 591 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 SLC6A12P48065 614 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 SLC11A1P49279 550 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 ZNF45Q02386 682 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 PTCHD3Q3KNS1 767 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 ANKS3Q6ZW76 656 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 CLECL1Q8IZS7 167 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 CBARPQ8N350 705 aaPredicted RBP23.7■■□□□ 1.38
DDX41-202ENST00000503078 SLC12A9Q9BXP2 914 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 TMEM161AQ9NX61 479 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 TESMINQ9Y4I5 508 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 A8MX80 341 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 DSCR3O14972 297 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 CDK1P06493 297 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 GGT2P36268 569 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 CSKP41240 450 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 KCNJ10P78508 379 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 SREBF2Q12772 1141 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 CCSAPQ6IQ19 270 aaPredicted RBP23.7■■□□□ 1.38
DDX41-202ENST00000503078 DNAJC22Q8N4W6 341 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 FAM83FQ8NEG4 500 aaPredicted RBP23.7■■□□□ 1.38
DDX41-202ENST00000503078 OR8J2Q8NGG1 315 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 KLF16Q9BXK1 252 aaPredicted RBP23.7■■□□□ 1.38
DDX41-202ENST00000503078 RUBCNLQ9H714 662 aa23.7■■□□□ 1.38
DDX41-202ENST00000503078 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.69■■□□□ 1.38
DDX41-202ENST00000503078 AGAP14A8MT82 685 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 PRAMEF4O60810 478 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 RPLP0P05388 317 aaKnown RBP23.69■■□□□ 1.38
DDX41-202ENST00000503078 HIST1H2AGP0C0S8 130 aaPredicted RBP23.69■■□□□ 1.38
DDX41-202ENST00000503078 HIST1H2ADP20671 130 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 RRM2P31350 389 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 CARTPTQ16568 116 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 PRAMEF9Q5VWM5 478 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 TRAF7Q6Q0C0 670 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 TPGS1Q6ZTW0 290 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 GGHQ92820 318 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 HIST1H2AHQ96KK5 128 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 HIST1H2AJQ99878 128 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 H2AFJQ9BTM1 129 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 CDADC1Q9BWV3 514 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 CEP44Q9C0F1 390 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 TPT1P8Q9HAU6 139 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 PRDM8Q9NQV8 689 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 FKBP14Q9NWM8 211 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 TRPM5Q9NZQ8 1165 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 PCDHB11Q9Y5F2 797 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 CLCA1A8K7I4 914 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 NT5C1B-RDH14C9J2C7 533 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 SUV39H1O43463 412 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 GKP32189 559 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 S100A5P33763 92 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 HNMTP50135 292 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 PRKCDQ05655 676 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 TAS1R1Q7RTX1 841 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 FAM124AQ86V42 546 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 ZSWIM9Q86XI8 627 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 RNF175Q8N4F7 328 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 KBTBD8Q8NFY9 601 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 CCDC59Q9P031 241 aaKnown RBP23.69■■□□□ 1.38
DDX41-202ENST00000503078 HCSTQ9UBK5 93 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 SPASTQ9UBP0 616 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 SLC22A14Q9Y267 594 aa23.69■■□□□ 1.38
DDX41-202ENST00000503078 ADAM12O43184 909 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 C8GP07360 202 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 CRYBA2P53672 197 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 PARP16Q8N5Y8 322 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 GPR26Q8NDV2 337 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 ZNF675Q8TD23 568 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 ALG14Q96F25 216 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 ZIC5Q96T25 663 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 SPATA9Q9BWV2 254 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 AMBNQ9NP70 447 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 ADPRHL2Q9NX46 363 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 ZDHHC3Q9NYG2 299 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 PADI2Q9Y2J8 665 aa23.68■■□□□ 1.38
DDX41-202ENST00000503078 EIF3FO00303 357 aaPredicted RBP23.67■■□□□ 1.38
DDX41-202ENST00000503078 SMAD6O43541 496 aaKnown RBP23.67■■□□□ 1.38
DDX41-202ENST00000503078 ASNA1O43681 348 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 SPNP16150 400 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 GRK5P34947 590 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 PXNP49023 591 aaPredicted RBP23.67■■□□□ 1.38
DDX41-202ENST00000503078 FLT3LGP49771 235 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 LRIT3Q3SXY7 679 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 DCAF4L2Q8NA75 395 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 FBXO22Q8NEZ5 403 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 SKA2Q8WVK7 121 aaPredicted RBP23.67■■□□□ 1.38
DDX41-202ENST00000503078 TTPALQ9BTX7 342 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 YIPF2Q9BWQ6 316 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 UPK3BL1B0FP48 263 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 UPK3BL2E5RIL1 263 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 YY2O15391 372 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 NUDT7P0C024 238 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 HMGA1P17096 107 aaKnown RBP23.67■■□□□ 1.38
DDX41-202ENST00000503078 GTF2E2P29084 291 aaKnown RBP23.67■■□□□ 1.38
DDX41-202ENST00000503078 TUFMP49411 452 aaKnown RBP23.67■■□□□ 1.38
DDX41-202ENST00000503078 GATMP50440 423 aa23.67■■□□□ 1.38
DDX41-202ENST00000503078 ELAVL2Q12926 359 aaKnown RBP23.67■■□□□ 1.38
DDX41-202ENST00000503078 TSPAN33Q86UF1 283 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms