RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 KIAA0895LQ68EN5 471 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 TMIGD1Q6UXZ0 262 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 C1orf52Q8N6N3 182 aaKnown RBP21.18■□□□□ 0.98
PTPN13-205ENST00000502971 TMEM145Q8NBT3 493 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 OR2L8Q8NGY9 312 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 PRDM8Q9NQV8 689 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 ACTR3BQ9P1U1 418 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 CA14Q9ULX7 337 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 MAN2B2Q9Y2E5 1009 aa21.18■□□□□ 0.98
PTPN13-205ENST00000502971 TCRBV3S1A0A5B6 114 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 PRAMEF26H0Y7S4 382 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 MTHFD1P11586 935 aaKnown RBP21.17■□□□□ 0.98
PTPN13-205ENST00000502971 GSK3BP49841 420 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 CCR8P51685 355 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 HNRNPFP52597 415 aaKnown RBP21.17■□□□□ 0.98
PTPN13-205ENST00000502971 RAE1P78406 368 aaKnown RBP21.17■□□□□ 0.98
PTPN13-205ENST00000502971 GALNT18Q6P9A2 607 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 ABRAXAS1Q6UWZ7 409 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 PTRH1Q86Y79 214 aaKnown RBP21.17■□□□□ 0.98
PTPN13-205ENST00000502971 LINC01555Q8NAE3 123 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 ITCHQ96J02 903 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 EGLN2Q96KS0 407 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 PPM1MQ96MI6 270 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 KCTD14Q9BQ13 255 aaPredicted RBP21.17■□□□□ 0.98
PTPN13-205ENST00000502971 AIF1LQ9BQI0 150 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 ACAT2Q9BWD1 397 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 KCNH6Q9H252 994 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 SPNS1Q9H2V7 528 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 NT5DC2Q9H857 520 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 GMPR2Q9P2T1 348 aaKnown RBP21.17■□□□□ 0.98
PTPN13-205ENST00000502971 AP3M1Q9Y2T2 418 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 COLEC10Q9Y6Z7 277 aa21.17■□□□□ 0.98
PTPN13-205ENST00000502971 ERN1O75460 977 aaKnown RBP21.16■□□□□ 0.98
PTPN13-205ENST00000502971 SERPINB1P30740 379 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 TIA1P31483 386 aaKnown RBP eCLIP21.16■□□□□ 0.98
PTPN13-205ENST00000502971 RABIFP47224 123 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 MEF2AQ02078 507 aaPredicted RBP21.16■□□□□ 0.98
PTPN13-205ENST00000502971 MTAPQ13126 283 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 TPRG1LQ5T0D9 272 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 LCN8Q6JVE9 175 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 GPR180Q86V85 440 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 PQLC1Q8N2U9 271 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 GOLM1Q8NBJ4 401 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 TOE1Q96GM8 510 aaKnown RBP21.16■□□□□ 0.98
PTPN13-205ENST00000502971 NELL2Q99435 816 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 SH3GL1Q99961 368 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 RHBGQ9H310 441 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 VCX3BQ9H321 246 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 C6orf106Q9H6K1 298 aaPredicted RBP21.16■□□□□ 0.98
PTPN13-205ENST00000502971 CYP8B1Q9UNU6 501 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 DMTF1Q9Y222 760 aa21.16■□□□□ 0.98
PTPN13-205ENST00000502971 AQP12BA6NM10 295 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 OR52A4PA6NMU1 304 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 LRATO95237 230 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 IGHV4-34P06331 123 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 ANXA4P09525 319 aaPredicted RBP21.15■□□□□ 0.98
PTPN13-205ENST00000502971 PTX3P26022 381 aaPredicted RBP21.15■□□□□ 0.98
PTPN13-205ENST00000502971 NDUFS1P28331 727 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 HTR1EP28566 365 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 NUDT1P36639 197 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 STARD6P59095 220 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 PHC1P78364 1004 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 MUM1Q2TAK8 710 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 PGS1Q32NB8 556 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 IRAK1BP1Q5VVH5 260 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 ANO7Q6IWH7 933 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 ABI3BPQ7Z7G0 1075 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 TMEM126BQ8IUX1 230 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 AQP12AQ8IXF9 295 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 TSTD1Q8NFU3 115 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 OR4K1Q8NGD4 311 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 OR52E1Q8NGJ3 308 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 TSACCQ96A04 125 aaPredicted RBP21.15■□□□□ 0.98
PTPN13-205ENST00000502971 NRTNQ99748 197 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 TRIM8Q9BZR9 551 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 KIR3DX1Q9H7L2 352 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 VAPAQ9P0L0 249 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 FBXL21Q9UKT6 434 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 PCOLCE2Q9UKZ9 415 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 NEUROG3Q9Y4Z2 214 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 PCDHB11Q9Y5F2 797 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 A0A096LPI6 279 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 PRSS51A0A1B0GVH4 220 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 CASQ2O14958 399 aaPredicted RBP21.15■□□□□ 0.98
PTPN13-205ENST00000502971 KIR3DL1P43629 444 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 SRP54P61011 504 aaKnown RBP21.15■□□□□ 0.98
PTPN13-205ENST00000502971 REEP5Q00765 189 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 FXNQ16595 210 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 LRIF1Q5T3J3 769 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 CYP2R1Q6VVX0 501 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 Q6ZSR6 202 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 GJD3Q8N144 294 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 DNAJC9Q8WXX5 260 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 TRNAU1APQ9NX07 287 aaKnown RBP21.15■□□□□ 0.98
PTPN13-205ENST00000502971 WSB2Q9NYS7 404 aaPredicted RBP21.15■□□□□ 0.98
PTPN13-205ENST00000502971 SCHIP1Q9P0W5 487 aaPredicted RBP21.15■□□□□ 0.98
PTPN13-205ENST00000502971 TBC1D29Q9UFV1 150 aa21.15■□□□□ 0.98
PTPN13-205ENST00000502971 SCAMP1O15126 338 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 PCDH7O60245 1069 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 DFNA5O60443 496 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms